Arvicanthis niloticus (African grass rat): 143440109
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Entry
143440109 CDS
T08817
Symbol
Esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu01522
Endocrine resistance
anu04081
Hormone signaling
anu04915
Estrogen signaling pathway
anu04917
Prolactin signaling pathway
anu04919
Thyroid hormone signaling pathway
anu04961
Endocrine and other factor-regulated calcium reabsorption
anu05200
Pathways in cancer
anu05205
Proteoglycans in cancer
anu05207
Chemical carcinogenesis - receptor activation
anu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
143440109 (Esr1)
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
143440109 (Esr1)
04917 Prolactin signaling pathway
143440109 (Esr1)
04919 Thyroid hormone signaling pathway
143440109 (Esr1)
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
143440109 (Esr1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
143440109 (Esr1)
05205 Proteoglycans in cancer
143440109 (Esr1)
05207 Chemical carcinogenesis - receptor activation
143440109 (Esr1)
09162 Cancer: specific types
05224 Breast cancer
143440109 (Esr1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
143440109 (Esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
143440109 (Esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
anu03310
]
143440109 (Esr1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
143440109 (Esr1)
Nuclear receptors [BR:
anu03310
]
3. Estrogen like
3A. Estrogen receptor
143440109 (Esr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
ESR1_C
Motif
Other DBs
NCBI-GeneID:
143440109
NCBI-ProteinID:
XP_076782870
LinkDB
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Position
28:complement(14875356..15246922)
Genome browser
AA seq
646 aa
AA seq
DB search
MLNLYHLGLHMCVAMLSLYHTRGPSAAEPSACAGSQSVPRRPPLTMTMTLHTKASGMALL
HQIQGNELEPLNRPQLKMPMERALGEVYVDNSKPAVFNYPEGAAYEFNAAAAAAAAAAAS
APVYGQSGIAYGPGSEAAAFGANSLGGFPQLSSVSPSPLMLLHPPPQLSPFLHPHGQQVP
YYLENEPSAYAVRDTGPPAFYRSNSDNRRQNSRERLSSNEKGSMIMESAKETRYCAVCND
YASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGM
MKGGIRKDRRGGRMLKHKRQREDLEGRNEIGASGDMRATNLWPSPLVIKHTKKNSPALSL
TADQMVSALLDAEPPMIYSEYDPSRPFSEASMMGLLTNLADRELVHMINWAKRVPGFGDL
NLHDQVHLLECAWLEILMIGLIWRSMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLA
ASTRFRMMNVQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTLIHLM
AKAGLTLQQQHRRLAQLLLILSHIRHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLH
APASNRMGVPPEEPSQSQLATTSSTSAHSLQTYYIPPEAEGFPNTI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatctctatcacttgggactacatatgtgtgtggccatgttgagtctctatcac
acacgtggcccatccgctgctgagccctctgcgtgcgcggggagccaatctgtacctcgc
cggccgccactaaccatgaccatgacccttcacaccaaagcctcgggaatggccttgttg
caccagatccaagggaacgagctggagcccctcaaccgcccgcagctcaagatgcccatg
gagcgggccctgggcgaggtgtacgtggacaacagcaaacccgccgtgtttaactacccg
gagggcgccgcctacgagttcaacgccgctgccgctgctgctgccgctgccgccgcctcg
gcgcctgtctatggccagtcgggcatcgcatacggacccgggtccgaggcggctgccttc
ggtgccaacagcctggggggttttccccagctcagcagcgtgtcgcccagcccgctgatg
ctgttgcatccgccgccgcagctgtcgcctttcctgcacccgcatggccagcaggtgccc
tactacctggagaacgagcccagcgcctacgccgtgcgcgacaccggccctcccgccttc
tacaggtcaaattctgataatcgacgccagaatagccgcgagagactgtccagcaatgag
aagggaagcatgatcatggagtctgccaaggagactcgctactgtgctgtgtgcaacgac
tatgcctctggctaccattatggggtctggtcctgtgaaggctgcaaggctttctttaag
agaagcattcaaggacataatgactacatgtgtccagctacaaaccaatgcaccattgac
aagaaccggaggaagagttgccaggcttgccggctgcgaaaatgttacgaagtgggcatg
atgaaaggtgggatacggaaagaccgccgaggagggagaatgctgaaacacaagcgtcag
agagaagatttggaaggccgaaatgaaattggcgcttcaggagacatgagggccaccaac
ctttggccaagccctcttgtgattaagcacactaagaagaatagccctgccctgtccttg
acagcagaccagatggtcagtgccttgttggatgctgaaccgcccatgatctattctgaa
tatgatccttctagaccattcagtgaagcctcgatgatgggcctactgaccaacctggca
gacagggagctggttcatatgattaactgggcaaagagagtaccaggttttggggacttg
aatctccatgatcaggtccaccttctcgagtgtgcctggctggagattctgatgattggt
ctcatctggcgctccatggaacaccccgggaagctcctgttcgcacctaacttgctcctg
gacaggaatcaaggtaaatgtgtagaaggcatggtggaaatctttgacatgctgttggct
gcgtcaactcggttccgcatgatgaacgtgcagggagaagagtttgtgtgcctcaaatcg
atcattttgcttaattcgggagtgtacacatttctgtctagcaccttgaagtctctggaa
gagaaagaccacatccatcgtgtcctggacaagatcacagacactttgatccacctgatg
gccaaagccggcctgactctgcagcagcagcatcgccgcctggcccagctcctcctcatt
ctttcccatatccggcacatgagtaacaaaggcatggaacatctctacaacatgaaatgc
aagaacgtcgtgcccctctatgacctgctgctggagatgctggatgctcaccgccttcat
gctccagccagtaatcgcatgggagtgcccccagaggagcccagccagagccagctggcc
accaccagctccacttcagcacattccttacaaacttactacatacccccggaagcagag
ggcttccccaacacgatctga
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