Arvicanthis niloticus (African grass rat): 143440392
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Entry
143440392 CDS
T08817
Symbol
Homer1
Name
(RefSeq) homer protein homolog 1 isoform X1
KO
K15010
homer
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04068
FoxO signaling pathway
anu04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
143440392 (Homer1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
143440392 (Homer1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
143440392 (Homer1)
Cilium and associated proteins [BR:
anu03037
]
Other cilia and associated proteins
Stereociliary proteins
143440392 (Homer1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH1
T4SS_LegC2C7
GAS
CCDC39
CCDC172
CEP89
CCDC192
LEKR1
Rod_CreS
HMMR_N
CCDC89
HH_AprE
BLOC1_2
HmpF
EVH1_PP4R3
SPC25_N
DAHL
NOCA1_mid
CLIP1
YGR130C_N
At4g38062_N
ATG16
FUSC
FKBP15
NPV_P10
DUF4164
TMF_TATA_bd
CEP131_C
CALCOCO1
Kebab_C
Motif
Other DBs
NCBI-GeneID:
143440392
NCBI-ProteinID:
XP_076783268
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All DBs
Position
29:17525657..17636166
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AA seq
366 aa
AA seq
DB search
MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINST
ITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARLAKEKSQEK
MELTSTPSQESAGGDLQSPLTPESINGTDDERTPDVTQNSEPRAEPTQNALPFSHSAGDR
TQGLSHASSAISKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKR
VTELECVSSQANAVQSHKTELNQTVQELEETLKVKEEEIERLKQEIDNARELQEQRDSLT
QKLQEVEIRNKDLEGQLSDLEQRLEKSQNEQEAFRSNLKTLLEILDGKIFELTELRDNLA
KLLECS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgggggaacaacctatcttcagcactcgagctcatgtcttccagattgatccgaacaca
aagaagaactgggtacccaccagcaagcatgcagttactgtatcttacttttatgacagc
acaagaaatgtgtataggataatcagtttagatggctcaaaggcaataataaatagcacc
atcactccaaacatgacatttactaaaacatctcaaaagtttggccagtgggctgacagc
cgggcaaacactgtttatggactgggattctcctctgagcatcatctttccaaatttgca
gaaaagtttcaggaatttaaagaagctgctcggcttgcaaaggagaagtcgcaggagaag
atggaactgaccagtaccccttcacaggaatcagcaggaggagatcttcagtctccttta
acaccggaaagtatcaatgggacagacgatgagagaacacctgatgtgacacagaactca
gagccaagggctgagccaactcagaatgcattgccattttcacatagtgctggggatcga
acccagggcctctctcatgctagttcagcaatcagcaaacactgggaggctgaactagcc
accctcaaagggaacaatgccaaactcaccgcagccctgctggagtccactgccaacgtg
aagcagtggaagcagcagcttgccgcctatcaggaggaagcagagcggctgcacaagcgg
gtcactgaactggaatgtgttagtagtcaagcaaacgctgtgcagagccacaagacagag
ctgaatcagaccgtgcaggaactggaagagacactgaaagtaaaggaagaggaaatagaa
agattaaaacaagaaattgacaatgccagagaactccaggaacagagggactctctgact
cagaagctacaggaagttgaaattcgaaataaagacctggaggggcagctgtctgaccta
gaacagcgtctggagaagagccagaacgaacaagaggctttccgaagtaacctgaagaca
ctcttagaaattctggatggaaaaatatttgaactaacagaattacgagataatttggcc
aagctactagaatgcagctag
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