Arvicanthis niloticus (African grass rat): 143440728
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Entry
143440728 CDS
T08817
Symbol
Trim28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
anu01001
]
143440728 (Trim28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
143440728 (Trim28)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
143440728 (Trim28)
Protein kinases [BR:
anu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
143440728 (Trim28)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
143440728 (Trim28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
PHD
zf-RING_UBOX
zf-C3HC4
zf-B_box_Trim66
PHD_2
PHD-1st_NSD
zf-RING_2
Prok-RING_1
YqxI
YaaC
Motif
Other DBs
NCBI-GeneID:
143440728
NCBI-ProteinID:
XP_076783598
LinkDB
All DBs
Position
30:complement(1247311..1253839)
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AA seq
835 aa
AA seq
DB search
MAASAAAATAAAAAVTASPAASGSSGSGEGSAGGEKRPAASSAAASSASAASPAGGGGEA
QELLEHCGVCRERLRPERDPRLLPCLHSACSACLGPATPAAANNSGDGGSAGDGAMVDCP
VCKQQCYSKDIVENYFMRDSGSKASSDSQDANQCCTSCEDNAPATSYCVECSEPLCETCV
EAHQRVKYTKDHTVRSTGPAKTRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHK
DHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMA
ILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNN
TALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNST
GPGPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFASDDPYSSAEPHVSGMKRSRSGEGEVS
GLMRKVPRVSLERLDLDLTSDSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQAGTVPP
GAPGAPPLPGMAIVKEEETEAAIGAPPAAPEGPETKPVLMALTEGPGAEGPRLASPSGST
SSSLEVVAPEVTSAPVSGPGILDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDV
PGEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPANQRKCERVLLALFCHEPCRP
LHQLATDSTLSMEQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDK
ADVQSIIGLQRFFETRMNDAFGDTKFSAVLVEPPPLNLPNAGLSSQELSGPGDGP
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcagcggcgactgcagcggcagcggccgtgacggcctcccccgcg
gcctctggcagctcagggtcgggcgagggctcggcgggcggtgagaagcgcccggccgcc
tcttcagccgcggcgtcctctgcatccgcggcgtccccggcggggggcggtggcgaggcg
caggagctcctggagcactgcggcgtgtgtcgcgagcgcctgcggcctgagcgggatcct
cgactgctgccctgcctccattcggcctgtagtgcctgcctgggccccgctacacccgcc
gcggcgaataattcgggggatggcggctcggcgggcgacggcgctatggtggattgtcca
gtgtgcaagcagcagtgctactccaaagacatcgtggagaattatttcatgcgtgatagt
ggcagtaaggcctcttctgactcccaggatgctaaccagtgctgcactagctgtgaagat
aatgccccggccactagctattgtgtggagtgctctgaaccactttgtgaaacctgtgtg
gaggctcaccagagggtgaaatacaccaaggaccacactgtgcgctccacagggccggct
aagactcgagatggagaacgaacagtctattgtaatgtacacaagcatgaaccccttgtg
ctgttttgtgagagctgtgacactctcacttgccgggactgccagcttaacgctcacaaa
gaccatcagtaccagttcttggaagatgcagtgaggaaccaacgtaaactcttggcttca
ttggtgaaacgtcttggggacaaacatgccacactgcagaaaaacaccaaggaggttcga
agctcgatccgccaggtgtctgatgtgcagaagcgagtacaggttgatgtcaagatggcc
attctgcagatcatgaaggagctaaataagcggggccgagttctggtcaatgatgcccag
aaggtgaccgagggtcagcaggaacgtctggagcggcagcactggaccatgaccaaaatc
cagaagcaccaggaacacattttgcgatttgcctcttgggctttggagagtgataataat
acagctctcttgctttcgaagaagctgatctatttccagctgcatcgggccctcaaaatg
attgtggatcctgtggagcctcatggtgagatgaagtttcagtgggatctcaatgcctgg
accaagagtgctgaagcctttggtaagattgtggctgagcgtcctggtacgaactccaca
ggtcctgggcccatggctcctccaagagccccaggccccttaagcaagcaaggttctggc
agtagccagcctatggaagtacaagagggctatggctttgcatcagatgatccgtactca
agtgcagagccacatgtatcgggcatgaaacggtcccgctctggtgagggagaggtaagt
ggcctcatgaggaaggtgccacgtgtaagccttgaacgcctggatctggatctcacctct
gatagccagccaccagtcttcaaggtctttcctggaagcactactgaggactacaatctg
attgttattgagcgtggtgctgcagcagcagctgctggtcaggctgggactgtgccacca
ggagcccctggtgccccacccctgcctggcatggccattgtcaaggaagaagagacagaa
gctgctattggggcccctcctgctgcccctgagggtcctgaaaccaagcccgtgttgatg
gctctgactgaaggccctggtgctgaaggacctcgtctagcttcacctagtggcagtact
agctcaagcttggaggtggtggcacctgaggttacctcagccccagtaagtgggccaggt
atcctggatgacagtgctactatctgccgtgtctgccagaagcccggtgacctggtcatg
tgcaaccagtgcgagttttgcttccacctggattgccacctccctgccctgcaggatgtt
ccaggggaggaatggagttgctcgctctgccacgtgctgcctgacctaaaggaggaagat
ggaagccttagcctggatggagcagatagtactggtgtggtagctaaactatcaccagcc
aaccagcggaaatgtgagcgtgttctgctggccctgttctgtcatgaaccatgccgccct
ctgcatcagctggctactgactctacactctccatggagcagcctggtggtaccctagac
ctgaccttgattcgtgctcgcctccaagaaaagctgtcacctccttatagctccccccag
gagtttgcccaagatgtgggccgcatgttcaaacagttcaacaagctgactgaggacaag
gcggatgttcagtccatcatcggcctgcagcgcttctttgagacacgcatgaacgatgcc
tttggtgacaccaagttttctgctgtgctggtagaaccaccaccactgaaccttcccaac
gctggcctaagttctcaggagctgtctggccctggtgatggcccctga
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