Arvicanthis niloticus (African grass rat): 143441050
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Entry
143441050 CDS
T08817
Symbol
Tbpl1
Name
(RefSeq) TATA box-binding protein-like 1 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05165
Human papillomavirus infection
anu05166
Human T-cell leukemia virus 1 infection
anu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143441050 (Tbpl1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
143441050 (Tbpl1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
143441050 (Tbpl1)
05165 Human papillomavirus infection
143441050 (Tbpl1)
09164 Neurodegenerative disease
05016 Huntington disease
143441050 (Tbpl1)
05017 Spinocerebellar ataxia
143441050 (Tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
143441050 (Tbpl1)
03021 Transcription machinery [BR:
anu03021
]
143441050 (Tbpl1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
143441050 (Tbpl1)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
143441050 (Tbpl1)
RNA polymerase III system
TFIIIB
143441050 (Tbpl1)
RNA polymerase I system
SL1/TIF-1B
143441050 (Tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
143441050
NCBI-ProteinID:
XP_076784225
LinkDB
All DBs
Position
30:complement(23528605..23553578)
Genome browser
AA seq
186 aa
AA seq
DB search
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIYPFVFE
SRKEIL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagacagtgatgttgcattggacattttaattacaaatgtagtctgtgttttt
agaacaagatgtcatttgaacttaaggaagattgctttggagggagcaaatgtaatttat
aagcgtgatgttgggaaagtgttaatgaagcttagaaaacctagaattacagctacaatt
tggtcctcaggaaaaattatttgcactggagcaacaagtgaagaagaagctaaatttggt
gccagacgtttagcccgcagtctgcagaaactaggttttcaggtaatttttacagatttt
aaggttgtgaatgttttggcagtttgtaacatgccctttgaaatccgtttgccagaattc
acaaagaacaatagacctcatgccagctatgaacctgaacttcatcctgcagtgtgctat
cggataaagtctctaagagctacattacagatattttcaacaggaagtatcacagtgaca
gggcctaatgtaaaggctgtggccactgccgtggagcagatctacccattcgtgtttgaa
agcaggaaggagattttataa
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integrated database retrieval system
