Anaerotignum sp. MB30-C6: RBQ60_00625
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Entry
RBQ60_00625 CDS
T09679
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
anv
Anaerotignum sp. MB30-C6
Pathway
anv02020
Two-component system
anv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
anv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBQ60_00625 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBQ60_00625 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anv03021
]
RBQ60_00625 (rpoN)
Transcription machinery [BR:
anv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBQ60_00625 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
HTH_23
HTH_Tnp_Tc3_2
W2
DUF6471
Arg_repressor
Fe_dep_repress
HTH_Tnp_ISL3
LacI
Motif
Other DBs
NCBI-ProteinID:
WMI81268
LinkDB
All DBs
Position
133721..135082
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AA seq
453 aa
AA seq
DB search
MDLSLQLAQKQILSQRMQQSVEILQMNTITLSEYIQELAEENPLLEWQDTSGEQPKKDDK
LLRKLEWLEEADEQNRSLYRVEQEDERDRQELIGRRERESLREYLLFQINILKVNEGVKH
VLRFLAQSTEDSGYLEQGALEAAEERFRLKGNCSADVLGILQSLDPPGIGARNLEECLLI
QLRLKQASSVAITMVEKHLQDLAKNRISYVAKQLKVTVDEAVDAYDEIRSCEPKPGRGFL
CENPVEYIVPDVFVEKREGELLVTINGTTTPKLFISQSYIKILREGGSEETKEYISNKLK
QAEWAMQCISKRESTLLETAKCIVEHQKEFFIRPDGQLKPLRMADVAECMQVHESTVSRA
VRDKYLQCDRGVLPLNTFFSKALSSEGTGSISADSIQQKIRLMIEDENKKKPFSDRELTE
KLQKEGIQISRRTVAKYREAMGIAGASGRKRYE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtggatttgtccctgcaattagcgcaaaagcaaattttatcacaaagaatgcaacaatct
gttgaaattttgcagatgaacacaattaccctttcggaatatattcaggagttggctgag
gaaaatcctcttttggaatggcaggacacctctggggagcagccaaaaaaagatgataaa
cttttgcgaaagctagagtggttggaagaagcggatgagcaaaaccgaagcttgtatcgt
gtggagcaagaagacgaaagggatcgtcaggaacttattggaagacgggaacgggaaagc
ttgcgtgaatatctcctattccaaattaatatattaaaggtgaatgaaggggtaaagcat
gtgttgcggtttttagcccaaagtacggaagatagcggttatctggaacaaggagcctta
gaggctgcagaagaaaggttccgactgaaaggaaattgcagtgctgatgttctaggaata
ctgcaatctttagacccccccggtataggggcaagaaatctagaagaatgcctgttgata
cagttgcgactaaagcaagcttctagcgttgctattactatggtagaaaaacacttacaa
gatttggccaaaaatagaattagttatgttgccaaacagttgaaggttacagtagatgag
gcagtggatgcctatgatgaaattcgaagttgtgagccaaaaccaggccgaggtttttta
tgtgaaaatccggtggaatatatcgtgcccgatgtttttgtggaaaaacgggagggggag
ctgttggtaacaatcaatggtactaccacccccaaattgtttatcagccagtcctatatt
aaaattttgcgagaaggcggttctgaggaaacaaaagagtatatttccaacaaattgaaa
caggcggaatgggcaatgcaatgtatttcaaaacgggaaagcactctgcttgaaacggca
aaatgcatcgttgagcatcaaaaagaattttttatacgcccggatggacaacttaagcct
ttgcgtatggcggatgttgccgagtgtatgcaggttcatgaatcaacggtaagccgtgcg
gtgagagataaatatcttcaatgcgatagaggtgttttgcccctgaacacctttttttca
aaagcgttatcgtcagaaggcacagggagtatttcagccgatagcattcaacaaaaaata
cgcttgatgattgaagatgaaaataaaaagaagccttttagtgacagagaactaacggaa
aagttgcaaaaagaaggaattcaaatttctcgcagaaccgttgcaaaataccgagaagcc
atggggattgcaggtgcatcaggcagaaaacgttacgagtaa
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