Anaerotignum sp. MB30-C6: RBQ60_00750
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Entry
RBQ60_00750 CDS
T09679
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
anv
Anaerotignum sp. MB30-C6
Pathway
anv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
anv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBQ60_00750 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anv03021
]
RBQ60_00750 (rpoD)
Transcription machinery [BR:
anv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBQ60_00750 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WMI81293
LinkDB
All DBs
Position
160802..161884
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AA seq
360 aa
AA seq
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MKSVEETTLLTRLEELVQLGKKKKSVLEYKEIMDHLADLELDPDRIDRIYEYLESQGIDV
LGNIEAEGEEEEAEKDLDLSLPEGINIDDPVRMYLKEIGKVALLTAEEEVELAQRMEAGD
EEAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYHKGYKFSTYAT
WWIRQAITRAIADQARTIRIPVHMVETINKLIRISRQLLQELGREPTAEELAVEMQMSED
KVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDDIPAPAEAAAFTLLKEQLIEVLDTLT
DREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatccgtcgaagaaactacgttgttgacccgtttagaggaactggttcaacttgga
aaaaagaaaaagagtgtattggaatataaagagatcatggatcatttggcggatttggaa
cttgaccccgatcgaattgaccgtatttatgagtacctggaatctcaaggaattgatgtt
ttaggtaacatagaagcggaaggagaagaggaggaggccgagaaggatctggatttgtca
ctacctgagggtattaacatcgatgatccagtacgtatgtatttaaaggaaatcggtaag
gttgccttgttaactgcagaagaagaagttgaacttgctcaacgtatggaagcaggcgac
gaggaggcaaagaaaaaacttgccgaagccaacttgcgattggttgttagtatagcaaag
cgttatgttggtagggggatgttattcctggatttgatacaggaaggaaaccttggtctg
attaaggcagttgaaaaatttgactaccataagggttataagtttagtacctatgcaaca
tggtggattagacaggcaattacccgtgccattgccgatcaggcaaggaccattcgtatt
cctgtacacatggtagaaacaatcaacaaattaattcgtatttccagacagcttttgcag
gaattaggtcgtgaaccgacggcagaagaactggcagtagaaatgcagatgtcagaagat
aaggttcgtgagattatgaaaatcgcacaggagcctgtttctttggaaacccctattggc
gaggaggaagatagccatttgggagactttatccccgatgatgatattcctgcgcccgca
gaagcagcagccttcactttattaaaggaacaactcattgaggtgttggacacgctgaca
gatagagaagaaaaagtattacgcttacgttttggcttggatgatggacgagcaagaacc
ttagaagaggtgggcaaagaatttaacgttacccgtgaacgtattcgccagattgaggca
aaggctcttagaaaactgcgacaccccagccgtagcaaaaagctgaaggactacttggaa
taa
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