Anaerotignum sp. MB30-C6: RBQ60_01640
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Entry
RBQ60_01640 CDS
T09679
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
anv
Anaerotignum sp. MB30-C6
Pathway
anv03030
DNA replication
anv03430
Mismatch repair
anv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBQ60_01640 (holB)
03430 Mismatch repair
RBQ60_01640 (holB)
03440 Homologous recombination
RBQ60_01640 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anv03032
]
RBQ60_01640 (holB)
03400 DNA repair and recombination proteins [BR:
anv03400
]
RBQ60_01640 (holB)
Enzymes [BR:
anv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBQ60_01640 (holB)
DNA replication proteins [BR:
anv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBQ60_01640 (holB)
DNA repair and recombination proteins [BR:
anv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBQ60_01640 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Mg_chelatase
AAA_22
NPHP3_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WMI81461
LinkDB
All DBs
Position
338020..339006
Genome browser
AA seq
328 aa
AA seq
DB search
MYTYKEIWGNGRLLQHLQNAVNNGKTSHAYLFVGGAGAGKRMIAKTFAKHLLCTAPKEEP
CGVCDSCRVFDSGNHPDVIHVTSEKKTLGVDEIRGQILETVDIKPYHYDKKVYIIHQAHT
MTVQAQNALLKTLEEPPSYAVFLLLAENMDVFLPTVLSRTVTLKLNPIAEEEVSRYLTQK
GAVPSEEAVFFAAYGQGRIGHALELIEDDTFRQMREEILTKMSRLPAMSLSDALLLAKEW
EVYKNDYRFLDIIGLWYRDLLAAKSLRDEGFIIQKDKKDMIFQAASEPSESLAKKAAAVV
KAKERFIQNGNFRLILEVMLMELKENRT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttgtatacctataaagagatttggggcaatgggcgtctgctccaacatttgcaaaatgca
gtaaacaatgggaagacatcccatgcatatttgtttgttgggggtgccggcgcaggaaag
cggatgattgccaagacctttgccaagcaccttttatgcactgctccaaaggaagagccc
tgtggagtttgtgatagctgtcgtgtgtttgacagtgggaatcaccccgatgtgattcat
gtgacttcagagaaaaaaacattgggtgtagatgaaattcgagggcaaatattagaaacg
gtagatataaagccttatcattatgataaaaaagtttatatcattcaccaagcccatacc
atgacggttcaagcccaaaatgcgttattaaaaaccctagaggagcctcccagctatgcg
gtatttttgctactggcggagaatatggatgtttttttacccaccgtcctttctagaacg
gtgacattaaaactgaaccccattgcggaggaggaagttagccgatatttaacgcaaaag
ggtgccgttccctccgaagaagctgtgttttttgccgcttatggacagggacgaattggc
catgcgttggaactaattgaagatgatacctttcgacagatgagagaagaaatcttaaca
aaaatgagccgattacctgcgatgagcctgtctgatgctttgcttttggcaaaagagtgg
gaagtttataagaacgattaccgttttttagatatcattggtttatggtatcgggatttg
ttggcggcaaaatcattgagggacgaaggttttattatacaaaaagataaaaaagacatg
atttttcaagcggcaagtgaaccgtcggagagtttagcaaaaaaagcagcagctgttgta
aaagcaaaagaacgtttcatacaaaacggaaattttcggctaattttagaggttatgctg
atggagttaaaggagaatagaacctaa
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