Anaerotignum sp. MB30-C6: RBQ60_04330
Help
Entry
RBQ60_04330 CDS
T09679
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
anv
Anaerotignum sp. MB30-C6
Pathway
anv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBQ60_04330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anv03019
]
RBQ60_04330
03009 Ribosome biogenesis [BR:
anv03009
]
RBQ60_04330
Enzymes [BR:
anv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RBQ60_04330
Messenger RNA biogenesis [BR:
anv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBQ60_04330
Ribosome biogenesis [BR:
anv03009
]
Prokaryotic type
rRNA helicases
RBQ60_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WMI81966
UniProt:
A0AA51CDP5
LinkDB
All DBs
Position
complement(815176..816792)
Genome browser
AA seq
538 aa
AA seq
DB search
MEHLKFEDMNLSPEICRAVLDMGFEEATPIQSMAISVVKEGKDVIGQSQTGTGKTAAFGI
PCLERVNPDDRRLQALILCPTRELAIQVSEEFRKLLKYKDNIRVLPIYGGQPIDRQIAAL
KKGAHVVIGTPGRVMDHMRRRTLKMETVNMMVLDEADEMLDMGFREDIEMILTKIPEDHQ
TLLFSATLSPEILDITRRFLKNPEFIKVVRKELTVPNIEQAYFDVKERTKLDALTRIIDV
YDPRLAIVFCNTKKRVDDLVELLQGRGYFAEGLHGDLKQPQRDKVMQKFRNGTIEILVAT
DVAARGIDVDDIDVVFNYDVPQDEEYYVHRIGRTGRAGRKGKAFTFCVGKEIFKLRDIMR
YTKTKIQQQKLPTLSDVEEMKTNIFLEKIKEVMNEGHLTKYVHLVDRLMNEDYAAIDIAA
ALLKNHLADVNVDELDVLDDINLGGTEIYGGDDSKMVRMFINSGKKNKIRAKDIVGAIAN
ESGVPGKALGSIDLYDDYTFVDVPKEYVKDVLVGMKGAKIKNKRIHMEIAKKDKGKKK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaacatttaaaatttgaagacatgaacttatcccctgaaatttgccgtgcagtttta
gatatggggtttgaagaagcaacgccaattcagtccatggcaattagcgttgtaaaagag
ggaaaggacgttatcggtcagtcccaaacaggtacaggaaaaactgcagcttttggtatt
ccttgtttagaacgtgttaatcctgacgacagacgtttgcaggcattaatcctttgcccc
accagagagctggcaattcaggtaagcgaagaattcagaaaacttctaaaatataaggat
aatattcgtgtattacccatttatggcggtcagcctattgacagacagattgccgctttg
aaaaaaggagcacatgtagtaatcggtacacccggtcgtgttatggaccatatgcgccgt
cgcactttaaaaatggaaaccgttaatatgatggttcttgatgaagctgacgaaatgtta
gatatgggcttccgtgaagatatcgaaatgatattaaccaaaattcccgaagaccatcaa
acactgctattctccgcaacattatcccccgaaattttggatatcaccagaagatttttg
aaaaaccccgagtttattaaggtggttcgtaaggaattgacggttcccaatattgagcag
gcatacttcgatgtaaaggaaagaacaaagctggatgctttaactcgtatcatcgacgtt
tatgatcctcgccttgccattgtgttttgtaatacaaaaaaacgtgttgatgatttggtg
gaacttcttcagggccgtggttactttgcagaaggcttacacggcgatttgaagcaacct
cagcgtgataaggtaatgcagaaattccgtaacggtaccatcgaaatcttagttgcaact
gatgttgcagctagaggtattgacgttgacgacatcgatgtagtatttaactacgatgtt
cctcaggatgaggagtattatgtacaccgtattggtcgtactggccgtgcaggtcgtaag
ggtaaagcctttactttctgtgttggcaaagaaatctttaagctgcgtgatatcatgcgt
tatacaaagacaaaaattcagcagcaaaaacttcctacattaagtgatgtggaagaaatg
aaaacaaatatcttcttagaaaagattaaagaagtaatgaatgaaggccatttgacaaaa
tacgttcatttggtagatcgcttgatgaatgaggactatgccgcaattgatattgcagcg
gctttgttaaaaaatcaccttgcagacgtaaacgttgacgaattggatgttcttgatgat
atcaatttaggcggaactgaaatttatggcggcgatgattcaaaaatggtgcgtatgttc
atcaattcaggaaagaaaaataaaattcgtgcaaaggatattgttggtgctatcgctaac
gaatctggcgttcctggtaaagccttgggctctattgacctttatgatgactacaccttt
gtggatgtaccaaaggaatatgtgaaagatgttttggttggcatgaagggtgcaaaaatt
aaaaacaaacgaattcatatggaaatcgcaaaaaaagataaaggcaagaaaaaataa
DBGET
integrated database retrieval system
