Anaerotignum sp. MB30-C6: RBQ60_06290
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Entry
RBQ60_06290 CDS
T09679
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
anv
Anaerotignum sp. MB30-C6
Brite
KEGG Orthology (KO) [BR:
anv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anv03009
]
RBQ60_06290 (rlmD)
Enzymes [BR:
anv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RBQ60_06290 (rlmD)
Ribosome biogenesis [BR:
anv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RBQ60_06290 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
MTS
PrmA
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_11
PCMT
Ubie_methyltran
UPF0020
Methyltransf_4
Methyltransf_12
RrnaAD
N6_N4_Mtase
Methyltransf_23
TPMT
CMAS
Motif
Other DBs
NCBI-ProteinID:
WMI82344
UniProt:
A0AA51GS46
LinkDB
All DBs
Position
1241115..1242488
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AA seq
457 aa
AA seq
DB search
MSLPVEKNKTYEMIVDALGSNGEGIGRIEGFTIFVEGALPEETIKVLILKTKKSYGYGKL
LEIISPSPYRVEPLCPVAKTCGGCQLQHFSYEGQLAYKAKKVKDDLERIGGLKNVDGLTA
CGMEDPWRYRNKAKFPVGMGKDEGVKIGFYAKRSHRIIDTPVCYLQDPVNDEITAIVRAF
MNEFQISAYDEEGHKGLVRHILTRVGRNSGEIMVCIVINGRRLPHSEVLVERLQQILGVV
SVVLNINKEQTNVILGKKVVTLWGKETIEDTLGGITFEISPLSFYQVNPAQTEVLYNKAV
EMAGLKGNETVLDLYCGIGTISLFFAKKAKKVFGVEIVPEAIADARRNAERNGITNVSFQ
VGAAEEVIPRLFREQGIRADVIVVDPPRKGCDQTLLDTITSINPDKLVYVSCNPATLARD
VARLCEKGFEVKDVQVVDQFPMTVHVETVVLMSRVDK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcctgtagagaagaataaaacatatgaaatgatcgttgatgccttgggtagc
aatggggagggaattggtagaattgaagggtttaccatttttgttgagggggcattgcct
gaagaaaccattaaggttttaattttaaaaacaaaaaaaagttatgggtatgggaagtta
ctggaaattatttcgccatcgccatatcgagtggaacccctctgtcctgttgcgaaaacc
tgtggtggctgtcaactgcagcatttctcttatgaggggcagcttgcatacaaagcaaag
aaggtaaaggatgatttagaacgcattggtgggttgaaaaatgtggatggtttgacagct
tgtggtatggaagatccttggcgttatcgaaataaagccaagtttcctgtgggcatgggg
aaagatgaaggggtaaaaattggtttttatgcgaagcgtagtcatcgcattatagataca
cctgtttgctatttgcaggaccctgtgaatgacgagataacggccattgtgcgggcgttt
atgaatgagttccaaatctctgcttacgatgaagaaggacataaggggttagtccgccat
attttaaccagagtggggagaaatagcggagaaatcatggtttgtatcgtaataaacgga
aggaggcttccccatagtgaagtgttggttgagcgtttacaacagattctaggcgtggta
tccgtcgtgttaaatatcaataaggaacagacaaatgtaatcttagggaaaaaagtagta
accctgtggggcaaggagacaattgaggatactttaggcggaatcacttttgaaatttcc
cccttgtcattttatcaagtgaaccccgctcaaactgaagttttatacaataaagccgtt
gagatggcaggtttgaaaggcaatgaaacagttttagacttatattgtgggattggtaca
atttctctgttcttcgcaaaaaaagcaaaaaaggtttttggggtagaaatcgttccggag
gcgattgctgatgcaagaagaaatgcagagcgaaacggaatcactaacgtttcttttcag
gttggggcagcggaagaagtgattcctagactgttccgtgaacaggggattagggcggat
gttattgtcgtagaccccccaagaaaagggtgcgaccaaactctccttgatacaattact
tcgattaatccagataaattggtgtatgtttcttgtaatcctgcaactcttgctagggat
gtggcgagattatgtgaaaagggatttgaggtaaaggatgtacaggtggttgatcagttt
ccgatgacagtgcatgttgagacggtagtattgatgtcaagggtagataagtaa
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