Anaerotignum sp. MB30-C6: RBQ60_12755
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Entry
RBQ60_12755 CDS
T09679
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
anv
Anaerotignum sp. MB30-C6
Pathway
anv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RBQ60_12755 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anv03021
]
RBQ60_12755 (rpoC)
03400 DNA repair and recombination proteins [BR:
anv03400
]
RBQ60_12755 (rpoC)
Enzymes [BR:
anv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RBQ60_12755 (rpoC)
Transcription machinery [BR:
anv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RBQ60_12755 (rpoC)
DNA repair and recombination proteins [BR:
anv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RBQ60_12755 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
tRNA_bind_4
Motif
Other DBs
NCBI-ProteinID:
WMI80683
LinkDB
All DBs
Position
complement(2610348..2613989)
Genome browser
AA seq
1213 aa
AA seq
DB search
MNTQNTEQGIVFDSIKIGLASPEKIHEWSRGEVKKPETINYRTLKPEKDGLFCEKIFGPT
KDWECHCGKYKRIRYKGVICDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMG
LILAMSPRALEKVLYFASYIVLNPGDTELQYKQLLSEREYREAYDKYGNVFEAAMGAEAV
KQLLMDIDLEKESVELKAQLEDTAGQKRVRIIKKLEVIESFRISGNKPEWMILDAIPVIP
PDIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDAL
IDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIYQC
GLPKEMAIELFKPFVMKKLVEDGLAHNIKSAKRMVERLQTEVWDILEDVIKEHPVMLNRA
PTLHRLGIQAFEPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAECRFLLLS
PNNLLKPSDGAPVTVPSQDMILGMYYLTLERDDRNAFYEEDILDGEGNVIKAKGDLIMRA
FKDEKEAILAYDNHEIALQEVIRVRRVLTFNGVAETRMVQTTVGRIIFNEAIPQNLGYVD
RTNEDEKFRYEIDFLVDKKQIGKIINRCINRCGSTETAAVLDKIKALGYKFSTKAALTVS
VSDMEIPKEKPEFLAEAEEKVDTITKKFRRGLMTDEERHNKVIEAWNIANDKITVALLAG
LGKYNNIYMMANSGARGSNSQIKQLAGMRGLMANPSGGIIELPIKANFREGLSVLEYFIS
AHGARKGLTDTALRTADSGYLTRRLVDVSQDIIIREWDCCEDSDKEAPGLWVSAFMDGNE
VIEGLQDRIRGRWSVLDVIHPETGEIIVPADTMITFDQAERVEKAGIKKVLIRTVLTCRS
NIGICAKCYGANMASGRYVRIGESVGIIAAQSIGEPGTQLTMRTFHTGGIAGDDITQGLP
RVEELFEARKPKGLAIIAEFAGRVTFNDTKKKREVIITNSETGEVKDYLIPYGSRIKVYD
GDDVEAGDEITEGSVNPHDILKIKGLRGVQDYMIQEVQRVYRLQGVEINDKHIEVIVRQM
LKRVKIEENGDSGFLPGSLVDWLVFENTNIALEAEGKTPANGARVLLGITKASLATDSFL
SAASFQETTRVLTEAAIKGKIDPLIGLKENVIIGKLIPAGTGMPRYRNVEIEPVGSQSAL
QDDGIYMDEDDMI
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaaaacacagagcaaggaatcgtatttgattccattaagattggtttggcg
tctcctgaaaaaattcatgagtggtcaagaggcgaggttaaaaaacccgaaacaattaac
tacagaacattaaaacctgaaaaagatggtcttttctgcgaaaagatttttggaccaaca
aaagattgggaatgccactgtggtaaatataaaagaatccgctacaaaggtgttatttgt
gatcgttgtggtgttgaagtaacaaaggcgaaggtaagacgtgaaagaatgggccatatt
gaactggctgcacctgtttctcatatttggtatttcaaagggatcccttccagaatgggt
ctgattcttgccatgagccccagagctttggaaaaggtactgtatttcgcatcttatatt
gtactcaatcctggtgatacagaattacagtacaaacagcttttaagtgaaagggaatac
agagaagcctatgacaaatacggcaatgttttcgaagctgcaatgggcgcagaggcggtt
aagcagttattgatggatattgacctggaaaaggaatctgttgaactgaaagcccagctg
gaagatactgcaggccaaaagagagtgcgtattatcaaaaaacttgaagtaatcgaaagc
tttagaatttctggaaacaagcctgaatggatgattctggatgctatccctgttattcct
cctgatattcgtcctatggttcagttggatggtggacgttttgctaccagtgacttgaac
gacttgtacagacgtgtaatcaacagaaataaccgtttgaagagattgttggatttaggt
gcccctgacattatcgttagaaatgaaaagagaatgctgcaggaagctgtggatgctttg
attgacaacggcagacgtggtagacctgtaacaggccctggtaaccgtgccctgaaatct
ctttctgatatgttgaaaggtaagcaaggccgtttccgtcagaatctcttgggtaaacgt
gttgactactccggtcgttccgttatcgtagttggccccgaactgaaaatttaccagtgt
ggtttgcctaaggaaatggcgattgagttgttcaagcctttcgtaatgaagaaattagta
gaagatggcttggctcacaacatcaaatctgcaaagagaatggttgaaagacttcagaca
gaagtttgggatattttagaagatgttattaaagaacatcctgttatgttgaaccgtgcc
ccaacactgcacagattgggtattcaggcttttgaacctgttttggttgaaggccgtgcc
attaagctgcatcctttggtatgtactgcttataacgccgacttcgatggtgaccagatg
gcggtgcacgttcccctttccgttgaggctcaggcagaatgccgtttcttactgctttct
cctaacaacttactgaaaccttctgatggcgcacctgtaaccgtaccttctcaggatatg
attttgggtatgtactatctgactttggaaagagacgatagaaacgccttttacgaagaa
gatattttggatggggaaggcaatgtaatcaaagcaaaaggcgacttgattatgagggcc
tttaaagatgaaaaagaggcaattcttgcttatgacaaccatgagattgctttgcaggaa
gtcattcgtgttagaagagtcttaacatttaacggagttgctgaaactcgtatggtgcag
accaccgttggccgcataattttcaacgaagcgattcctcagaacttgggctatgtagat
agaacgaacgaagacgaaaagttccgttatgaaattgacttcttggtagataaaaagcag
attggtaaaattatcaatagatgtatcaaccgttgtggttctactgaaactgcggcagtt
ttggataagattaaagctttgggttataagttctccacaaaagcagccttaaccgtatcc
gtatctgatatggaaattcctaaggaaaaaccggaattcttggctgaagcggaagaaaag
gtagatacgattaccaagaagtttagacgtggtttaatgacagacgaagaacgtcataac
aaagttatcgaggcttggaacattgccaacgataagattactgttgcgttgttggcaggt
ttgggtaaatataacaatatttatatgatggccaactctggtgcccgtggttccaacagc
cagattaaacagttggctggtatgcgtggtttgatggccaacccttctggtggtatcatc
gaattacctatcaaggcgaacttccgtgaaggtctgtctgtattggagtactttatttcc
gcccatggtgcaagaaaaggtttgacggatacggcacttagaacagccgattccggttac
ttgactcgtcgtttggtagacgtttctcaggatattatcattcgtgagtgggattgttgt
gaagacagcgataaggaagcacccggtttatgggtatctgctttcatggatggcaatgaa
gtaattgaaggcttacaggatagaatccgtggcagatggtctgtcctagatgtaattcat
ccagaaacaggagaaatcatcgttcctgcggatacaatgattacttttgatcaggcagaa
cgtgtggaaaaagcaggcattaagaaggtattaattcgtaccgtattgacttgccgttcc
aacatcggtatttgtgctaagtgctatggtgccaacatggcaagcggtagatatgttcga
atcggtgaatccgttggtatcattgcggcacagtctatcggtgagccaggtacacagctt
acaatgcgtaccttccacacgggtggtatcgctggtgatgacatcacgcagggtcttcct
cgtgttgaagaattatttgaagcaagaaagcctaagggccttgcaattatcgctgagttt
gctggacgtgtaacctttaacgatacaaagaagaagagagaagttattattacgaactct
gaaacaggagaagtaaaggattatctcattccttatggctccagaattaaagtttatgac
ggtgacgacgtagaagccggtgatgaaatcacggaaggtagcgtaaaccctcatgatatt
ctgaaaatcaaaggtttgcgtggcgtacaggattatatgattcaggaagtacagcgtgta
taccgtttacagggtgtagaaatcaacgataagcatattgaagtgattgttcgccagatg
ctaaagcgtgttaaaatcgaagaaaacggtgattctgggttcttgccaggcagcttggtt
gactggttggtattcgaaaatacaaatatcgctttagaagcagaaggaaagactcctgcc
aacggtgcacgtgttctgttgggtatcacaaaggcttctttggcaacagactccttcttg
tctgcggcatccttccaggagacaacaagagttttgacggaagctgcaatcaagggtaag
attgatccattgattggtctgaaagaaaacgttattatcggtaagctgattcccgctggt
acaggtatgcccaggtaccgcaacgtagaaatcgaacctgtgggtagtcaaagtgcttta
caggatgatggaatttatatggatgaagacgatatgatttaa
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