Anaerotignum sp. MB30-C6: RBQ60_14655
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Entry
RBQ60_14655 CDS
T09679
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
anv
Anaerotignum sp. MB30-C6
Pathway
anv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBQ60_14655 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anv03021
]
RBQ60_14655 (rho)
03019 Messenger RNA biogenesis [BR:
anv03019
]
RBQ60_14655 (rho)
Transcription machinery [BR:
anv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RBQ60_14655 (rho)
Messenger RNA biogenesis [BR:
anv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RBQ60_14655 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_25
OB_RNB
ATPase_2
AAA_16
AAA_22
Spore_III_AA
NACHT
AAA_14
Mor
ResIII
DUF7316
Motif
Other DBs
NCBI-ProteinID:
WMI81033
LinkDB
All DBs
Position
complement(2978774..2980207)
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AA seq
477 aa
AA seq
DB search
MGNDLQKKTLAELRDMAKEMDIKSISSLKKSELIDKIMEKQSQAEGMAVKRVTAYGFSLP
DGQEAVKKNEANLEAKEEETSHRERNIQKDEKTAVMENSVPGEGILEVMPDGFGFLRTQN
FLPGAGDIYVSPSQIRRFNLKTGDAVRGNIRTARDGEKFGALLFVRSVNGDQPDQAAKRP
SFEDLTPIYPEEKLCLEVGREELSGRIIDLCAPIGKGQRGMIVAPPKVGKTVLLTQMANA
ITKNHKEVHLIVLLIDERPEEVTDIQRSIEGENVEIVYSTFDEQPEHHKRVTEMVLERAK
RLVEQGKDLVILLDSLTRLARAYNLTIPPSGRTLSGGLDPAALYMPKRFFGAARNIEYGG
SLTILATALIDTGSKMDEVVFEEFKGTGNMELVLDKRLSERRIFPAVDIIKSGTRREEKL
LTDQELECNFTLRRMAATMSQMEMVEGFYDLMKKTQNNHEFMERLPIWEKTLGLFDK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgatctgcagaaaaaaactctggcagagctaagagatatggcgaaggaaatg
gacattaagtccatttcctcccttaaaaaaagtgaattaattgataaaattatggagaag
cagtctcaggcagaaggaatggcagttaagcgtgtgactgcttatggtttttctctgcca
gacggtcaagaagcagtgaaaaaaaatgaagcaaaccttgaggcgaaagaagaagagact
agccatagggaaagaaatatacaaaaggacgaaaagactgctgtgatggaaaacagtgtg
cctggtgagggtatattagaagtaatgcctgatgggtttggctttttaagaacacagaac
tttttacccggtgctggggatatctatgtatctccttcacaaattcgtcgttttaatttg
aagacgggggatgcagtaagggggaatatccgtactgccagagatggagaaaagtttggg
gcccttttatttgtgaggtctgtgaatggagatcagccggatcaggcagcaaaacgccct
agttttgaagatttaacacccatttaccctgaggagaagctttgccttgaagtaggaagg
gaagagctttcaggaaggattattgacctttgtgcacccattggtaagggccagagaggg
atgattgttgcgccgcccaaggtgggtaaaactgtgcttttgacacagatggccaatgct
attacaaaaaaccataaagaagtacatttaattgttcttttgattgatgaacgtccagag
gaggtaacggacattcagcgttccattgaaggagaaaatgttgaaattgtttattccact
ttcgacgaacagcccgagcatcataagcgtgtgacagaaatggttttggaaagagcaaag
cgtttggtggaacaaggaaaggacttggttattttattagacagcctgacaagattagca
agggcctataacctgaccattccccccagcggaagaaccctttccggtggtttggatcct
gccgcattgtatatgccaaagagattttttggtgctgcaagaaatattgaatatggcgga
agtttgaccatattggcaacggccttgattgatacaggcagcaaaatggatgaagtggtt
tttgaggaatttaaaggcacaggtaatatggaattggtgttggataaacgtctttccgaa
cgccgtattttccctgctgtggatattattaaatcgggcacgagacgggaagaaaagctc
cttacagatcaagagcttgaatgcaattttaccctacgtagaatggcagctaccatgagc
cagatggagatggtagaaggtttttatgacttgatgaaaaagacccaaaacaaccatgag
tttatggaaagattacctatctgggaaaagactttggggctatttgataaatga
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