Amycolatopsis nalaikhensis: QP939_00030
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Entry
QP939_00030 CDS
T10497
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
anw Amycolatopsis nalaikhensis
Pathway
anw03030
DNA replication
anw03430
Mismatch repair
anw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QP939_00030 (dnaE)
03430 Mismatch repair
QP939_00030 (dnaE)
03440 Homologous recombination
QP939_00030 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anw03032
]
QP939_00030 (dnaE)
03400 DNA repair and recombination proteins [BR:
anw03400
]
QP939_00030 (dnaE)
Enzymes [BR:
anw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QP939_00030 (dnaE)
DNA replication proteins [BR:
anw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QP939_00030 (dnaE)
DNA repair and recombination proteins [BR:
anw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QP939_00030 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WIV57135
UniProt:
A0ABY8XN94
LinkDB
All DBs
Position
complement(8657..12244)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSNDSFVHLHVHTEYSMLDGAAKIAPLFAEAARLGMPAVGMTDHGNMYGGDEFYQQSKKA
GIKPIIGIEAYIAPESRFHKKPVFWGQANQRGSDEFGEGGDVSGGGAYTHMTMLASNATG
LRNLFKLSSLASMQGYYRKPRMDRELISENHEGIIATTGCPSGEVQTRLRLGQREEAIQA
ASDYKDIFGADNFFLELMDHGLPIERSVREGLLEIGRLLDLKPLATNDSHYVTKDQADTH
SALLCVQAGKTLNDPTRFKFDGDGYYLKSAQEMREYWDKEVPGAADTTLMIAERVESYEE
VYTHKDRLPFFEVPEGYDQGGWLREEVKRGLKWRFPDGVPDPYYNERIEIELDVIIGKGF
PAYFLIVADLISYARRVGIRVGPGRGSAAGSLVAYVLGITNLDPIPQKLLFERFLNPERV
SMPDIDIDFDDRRRGEMIRYATEKYGADKVAQVITFGTIKTKAAIKDSARVHFGQPGYAI
ADKISKALPPPIMAKDIPLSGIVDSKHERYGEAAEVRALVETDEECKTIFETARGLEGLI
RNAGVHACAVIMSSEPLTNAIPLWQRDDGSIITGWDYPSCEAIGLLKMDFLGLRNLTVIG
DAIDNIKANRGIDVDLDTLGVDDPETYKLLARGDTLGVFQLDGGPMRDLLRRMEPTVFDD
IVAVGALYRPGPMGMNAHNDYADRKNGRQKVKPIHPELDEPLREILADTYGLIVYQEQIM
HIGQKVAGYTMGRADVLRRAMGKKKKEVLDKEFEGFEAGMRNSDLVPGGFSKEAIKALWD
TILPFAGYAFNKSHAAAYGLVSYWTAYLKANFTAEYMAALLTSVGDNKDKSAVYLSECRR
LGIKVLPPDVNESAMRFAAVGDDIRFGLGAVRNVGANVVESIIKTREEKGKYASFTDFLD
KSELVACNKRVIESLIKAGGFDSLGHTRLSMIQVHEDAVEAVVPLKRQEAMGQFDLFGFG
GDEGEAAPSSSPLAHLKFGEEEYPRKQLLAYEREMLGLYVSAHPLDGAERILRKHAPKPI
AGILADPPKEGEIVVSGLITSLERRVNKKGEPWAICTVEDMDASLEVLFFPKAYALFAGE
LIEDNAVLVKGRVNWREDKMSVFGGGLATLDLSEVGTGNGDDEPPLVLLAAAEKIDQSVV
SELRSTLLAHKGETPVHLKLVGKNQTVFALYDYPVKVSSMLIGELKGIRGITAST
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaacgattccttcgtccacctgcacgtccacaccgagtactcgatgctcgacggt
gcggcgaagatcgctcctctcttcgcggaggcggcgcgcctcggcatgcccgcggtcggc
atgaccgaccacggcaacatgtacggcggcgacgagttctaccagcagtccaagaaggcc
ggcatcaagccgatcatcggcatcgaggcctacatcgcgccggagagccggttccacaag
aagcccgtcttctggggccaggccaaccagcgcggctcggacgagttcggtgagggcggc
gacgtctccggtggcggtgcgtacacgcacatgaccatgctcgcgtcgaacgccaccggc
ctgcggaacctcttcaagctgtcctcgctggccagcatgcagggttactaccgcaagccg
cgcatggaccgcgagctgatctcggagaaccacgaaggcatcatcgccaccaccggctgc
ccgtcgggcgaggtgcagacccggctgcggctgggccagcgcgaggaggccatccaggcc
gcgtccgactacaaggacatcttcggcgccgacaacttcttcctcgagctgatggaccac
ggcctgccgatcgagcggtcggtccgcgagggcctgctcgagatcggccggctgctcgac
ctcaagccgctggcgacgaacgactcgcactacgtcaccaaggaccaggcggacacgcac
tcggcgctgctgtgcgtccaggccggcaagaccctcaacgacccgacgcggttcaagttc
gacggcgacggctactacctcaagtcggcgcaggagatgcgcgagtactgggacaaggag
gtcccgggcgcggcggacacgacgctgatgatcgccgagcgcgtcgagtcctacgaagag
gtctacacgcacaaggaccggctgccgttcttcgaggtgccggagggctacgaccagggc
ggctggctgcgcgaagaggtcaagcgcggcctcaagtggcgcttcccggacggcgtgccg
gacccgtactacaacgagcgcatcgagatcgagctcgacgtcatcatcggcaagggcttc
ccggcctacttcctgatcgtcgccgacctcatcagctacgcccggcgcgtcggcatccgg
gtcggcccgggccgtggttcggccgccggttcgctggtcgcgtacgtcctcggtatcacg
aacctggacccgatcccgcagaagctgctgttcgagcggttcctcaaccccgagcgcgtg
tcgatgcccgacatcgacatcgacttcgacgaccgccgccgcggcgagatgatccggtac
gccaccgagaagtacggcgccgacaaggtcgcccaggtcatcaccttcggcacgatcaag
accaaggccgcgatcaaggactccgcgcgcgttcacttcggccagccggggtacgcgatc
gcggacaagatctccaaggcgctgccgccgccgatcatggcgaaggacatcccgctctcg
ggcatcgtcgactccaagcacgagcgctacggcgaggcagccgaggtccgcgcgctcgtc
gagaccgacgaagagtgcaagacgatcttcgagaccgcccgcggtctcgagggcctgatc
cgcaacgccggcgtgcacgcctgcgcggtcatcatgtcgagcgagccgctgaccaacgcc
atcccgctctggcagcgcgacgacggctcgatcatcaccggctgggactacccgtcgtgc
gaggccatcggcctgctgaagatggacttcctgggcctgcggaacctcaccgtcatcggt
gacgcgatcgacaacatcaaggccaaccgcgggatcgacgtcgacctcgacaccctgggc
gtcgacgacccggagacgtacaagctgctggcccgcggtgacacgctcggcgtgttccag
ctggacggcggccccatgcgcgacctgctccggcgcatggagcccacggtgttcgacgac
atcgtcgcggtcggcgcgctgtaccgccccggcccgatgggcatgaacgcgcacaacgac
tacgccgaccgcaagaacgggcggcagaaggtcaagccgatccacccggagctggacgag
ccactgcgggagatcctggccgacacctacggcctgatcgtgtaccaagagcagatcatg
cacatcggccagaaggtggccgggtacacgatggggcgcgcggacgtgctccgccgcgcg
atgggcaagaagaagaaggaagtcctcgacaaggagttcgagggcttcgaagcgggcatg
cgcaacagcgacctggtgcccggcgggttctccaaggaagcgatcaaggcgctctgggac
acgatcctcccgttcgccggctacgcgttcaacaagagccacgcggccgcgtacggcctg
gtctcctactggaccgcctacctcaaggccaacttcaccgccgagtacatggcggccctg
ctcacctcggtgggtgacaacaaggacaagtcggcggtctacctgtccgagtgccgccgc
ctcggcatcaaggtgctgccgccggacgtcaacgagtcggccatgcggttcgcggccgtc
ggggacgacatccgcttcggcctgggtgccgtccgcaacgtcggcgcgaacgtcgtcgag
tcgatcatcaagacccgcgaggagaaggggaagtacgcctccttcaccgacttcctcgac
aagtccgagctggtggcctgcaacaagcgggtcatcgagtcgctgatcaaggcgggcggg
ttcgactcgctcggccacacgcggctgtcgatgatccaggtccacgaggacgcggtcgag
gccgtcgtcccgctcaagcgccaggaggcgatgggccagttcgacctgttcggcttcggc
ggggacgagggcgaggcggctccgtcgtcgtcgccgctcgcgcacctcaagttcggcgag
gaggagtacccgcgcaagcagctgctcgcctacgagcgcgaaatgctgggcctgtacgtc
tccgcgcacccgctcgacggcgccgagcgcatcctgcgcaagcacgccccgaagccgatc
gccggcatcctcgccgacccgcccaaggagggcgagatcgtcgtgtccgggctgatcacg
tcgctggagcggcgggtcaacaagaagggcgagccctgggcgatctgcacggtcgaggac
atggacgcctcgctcgaggtgctcttcttcccgaaggcgtacgcgctgttcgcgggtgag
ctgatcgaggacaacgccgtgctggtcaagggccgggtcaactggcgcgaggacaagatg
tcggtcttcggcggcggcttggcgacgctcgacctgtccgaggtgggtaccggcaacggc
gacgacgagccgccgctggtgctgctggccgcggcggagaagatcgaccagtcggtggtc
agcgagctgcggtcgacgctgctcgcccacaagggggagaccccggtgcacctcaagctg
gtgggcaagaaccagacggtcttcgcgctctacgactacccggtgaaggtcagctccatg
ctgatcggcgagctgaagggcatccgcgggatcaccgcttccacgtga
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