Amycolatopsis nalaikhensis: QP939_02240
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Entry
QP939_02240 CDS
T10497
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
anw Amycolatopsis nalaikhensis
Brite
KEGG Orthology (KO) [BR:
anw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anw03032
]
QP939_02240
03036 Chromosome and associated proteins [BR:
anw03036
]
QP939_02240
03400 DNA repair and recombination proteins [BR:
anw03400
]
QP939_02240
DNA replication proteins [BR:
anw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QP939_02240
Chromosome and associated proteins [BR:
anw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QP939_02240
DNA repair and recombination proteins [BR:
anw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QP939_02240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
WIV57533
LinkDB
All DBs
Position
complement(453596..454297)
Genome browser
AA seq
233 aa
AA seq
DB search
MANKAQLIEALTERLGDKKAASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGEAVRVKKTNVPAFRAGTTFKDVVSGAKKLPKATPVKRAAASTSATSRTAAAKPA
TTRSTTTRTRAAAAKPATTRATATKAAPKAAAAKTTTRAKAAPKATAAKSTTTRSTAAKP
AASRSTAAKTTAAKTTAAKTTAAKTTTARKTTAARKTTAAKAPAKRTSAAAKK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctgacggagcgcctgggcgacaagaaggcc
gcttccgaggcggtcgacggtctggtcgacatcatcatccggacggtcaacaagggcgaa
aaggtcaacatcaccggcttcggggtgttcgagaagcgcgcccgcgcggcccggaccgcc
cgcaacccgcgcaccggcgaggccgtgcgggtcaagaagaccaacgtgcccgccttccgc
gccgggaccaccttcaaggacgtcgtttccggcgcgaagaagctgccgaaggcgaccccg
gtcaagcgcgccgcggcgagcacctcggcgacgtcccgcacggcggcggcgaagcccgcc
accacgcgttcgacgacgacgcgcacccgcgcggcggcggcgaagccggcgaccacccgg
gccacggcgacgaaggccgccccgaaggccgcggccgcgaagacgacaacgcgggcgaag
gcggccccgaaggcgacggcggcgaagtcgacgacgacccgttcgacggcggccaagccc
gcggcttcccgctcgacggcggcgaagaccacggcggccaagacgacggccgcgaagacc
acggcggccaagaccacgacggcgcggaagacgaccgcggcgcggaagaccaccgcggcg
aaggccccggccaagcgaacctcggccgcggcgaagaagtga
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