KEGG   Amycolatopsis nalaikhensis: QP939_08630
Entry
QP939_08630       CDS       T10497                                 
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
anw  Amycolatopsis nalaikhensis
Pathway
anw03420  Nucleotide excision repair
anw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:anw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QP939_08630 (pcrA)
   03430 Mismatch repair
    QP939_08630 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:anw03400]
    QP939_08630 (pcrA)
Enzymes [BR:anw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QP939_08630 (pcrA)
DNA repair and recombination proteins [BR:anw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QP939_08630 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     QP939_08630 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 AAA_11 AAA_22 AAA_16 DUF2067
Other DBs
NCBI-ProteinID: WIV58677
UniProt: A0ABY8XT58
LinkDB
Position
complement(1804273..1806684)
AA seq 803 aa
MDTLFDLPAETPVRKPATGGQAELLDDLNPAQREAVTHAGGPLLVVAGAGSGKTRVLTRR
IAYLLGQRRVHPGEIMAITFTNKAAAEMRERVAALVGRRANAMWVSTFHSMCVRILRREA
KTLDMSSNFSIYDSDDTKRLITLVARDLDIDPKRYAARTLAVHISNLKNELTDPETAAAN
AGNDLERRVAEVYVEYQRRLSLANAFDFDDLIMRTVSLLQAFPAVAEYYRRRFRHVLVDE
YQDTNHAQYTLVRELAGTAPNEAGVEPAELCVVGDADQSIYAFRGATIRNIEEFERDFPN
AHTILLEQNYRSTQTILSAANAVIERNPNRRAKRLWTDSGDGEKIVGYVADNDHDEAAFV
AGEIDALAEKGEADYSDVAVFYRTNNQSRVFEEIFIRLGLPYKVVGGVRFYERREVRDMI
AYLRVLANPEDTVSLRRVLNVPKRGIGDRAEAVVATHAERERISFAQALRDAVDGKLPLL
NPRSVKAIGGFVALLDELGELVASGAEVHDVLEAVLEKTGYRVELEESDDPQDHTRVENL
DELVTVAREFAEITAEVAADENAELVVEDGVPAPGSLPAFLERVSLVADADSVPSPDGGE
EGDGGAGVVTLMTVHTAKGLEYPVVFCTGWEDGVFPHMRALGDPTELAEERRLAYVAITR
ARQRLYVSRAITRSAWGQPSMNPASRFLDELPPDLVDWRRLEPSSAGFGFGSGSRGTPRA
ATTWGGRRSSSPSSPGTSSFGKGWKDTVALKLDVGDRVSHDKYGLGTVISCDGVGPRATA
TIDFGAAGKVRLMLIGSVPMVKL
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggacaccctcttcgatctccccgccgagacccccgtgcgcaagcccgccaccggcggg
caggccgagctgctcgacgacctgaaccccgcccagcgcgaagccgtcacccacgccggt
ggcccgctgctggtggtggcgggcgcgggatcgggcaagacccgggtgctgacccgccgg
atcgcctacctgctcgggcaacgccgggtgcaccccggcgagatcatggcgatcaccttc
accaacaaggccgccgccgagatgcgcgagcgcgtcgccgcgctcgtcgggcgccgcgcg
aacgcgatgtgggtgtccacgttccactcgatgtgcgtgcggatcctgcgccgcgaggcg
aagacgctcgacatgtcgtcgaacttctccatctacgactccgacgacaccaagcggctc
atcacgctggtggcgcgcgacctcgacatcgacccgaagcggtacgccgcgcgcacgctc
gccgtgcacatctcgaacctcaagaacgagctgaccgacccggagacggcggcggcgaac
gcgggcaacgacctcgaacgccgcgtcgccgaggtctacgtcgagtaccagcggcggctg
tccctggccaacgcgttcgacttcgacgacctcatcatgcgcacggtctcgctgctgcag
gcgttcccggcggtcgccgagtactaccggcggcggttccgccacgtgctggtcgacgag
taccaggacacgaaccacgcgcagtacacgctggtgcgcgagctggccgggacggcgccg
aacgaagcgggtgtcgagccggccgagctgtgcgtcgtcggtgacgcggaccagtcgatc
tacgccttccgcggcgcgacgatccgcaacatcgaggagttcgagcgggacttccccaac
gcgcacaccatcctgctggagcagaactaccgctccacgcagacgatcctgtccgcggcg
aacgccgtgatcgagcggaacccgaaccgccgcgcgaagcggctgtggacggactcgggc
gacggcgagaagatcgtcggctacgtcgcggacaacgaccacgacgaagccgcgttcgtc
gcgggcgagatcgacgcgctggcggagaagggcgaagccgactactccgacgtcgccgtc
ttctaccgcaccaacaaccagtcccgcgtcttcgaagagatcttcatccggctcggcctg
ccgtacaaggtcgtcggcggcgtgcggttctacgagcggcgcgaagtccgcgacatgatc
gcgtacctgcgcgtgctggcgaacccagaagacacggtcagcctgcggcgcgtgctgaac
gtgcccaagcgcggcatcggcgaccgcgccgaagccgtcgtggcgacgcacgccgagcgc
gagcggatctcgttcgcgcaagcgctccgcgacgccgtcgacgggaagctgccgctgctg
aacccgcggtcggtcaaggcgatcggcgggttcgtcgcgctgctcgacgagctgggcgag
ctggtcgcctccggcgccgaggtgcacgacgtgctggaagccgtgctggagaagaccggc
taccgcgtcgagctcgaggagtccgacgacccgcaggaccacacgcgcgtggagaacctc
gacgagctcgtcacggtggcgcgggagttcgccgagatcaccgccgaggtcgccgcggac
gagaacgccgaactggtcgtggaggacggcgttccggcgcccggctcgctgcccgcgttc
ctcgagcgcgtgtcgctggtcgcggacgcggactcggtcccttcgcccgacggcggcgag
gaaggcgacggcggcgcgggcgtggtcacgctgatgaccgtgcacaccgcgaagggcctg
gagtacccggtggtgttctgcaccggctgggaggacggcgtcttcccgcacatgcgcgcg
ttgggcgatccgacggagctggccgaggaacggcggctcgcgtacgtcgcgatcacccgg
gcgcgccagcggttgtacgtctcgcgcgcgatcacgcgctcggcgtggggccagccgtcg
atgaacccggcgtcgcggttcctcgacgagctgccgccggacctcgtcgactggcggcgg
ctggagccctcgagcgctgggttcggcttcggttccggctcgcggggcacaccgcgcgcg
gcgacgacgtggggcggccgccggtcgtcttcgccgtcttcgccgggcacgtcgtcgttc
gggaagggctggaaggacacggtggcgctgaagctggacgtcggcgaccgggtcagccac
gacaagtacggcctgggcacggtgatctcgtgcgacggcgtcggcccccgcgccacggcg
acgatcgacttcggcgcggccgggaaggtccgcctgatgctcatcggcagcgtgccgatg
gtgaagctctaa

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