KEGG   Amycolatopsis nalaikhensis: QP939_09055
Entry
QP939_09055       CDS       T10497                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
anw  Amycolatopsis nalaikhensis
Pathway
anw03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:anw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    QP939_09055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:anw03021]
    QP939_09055
   03400 DNA repair and recombination proteins [BR:anw03400]
    QP939_09055
Enzymes [BR:anw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     QP939_09055
Transcription machinery [BR:anw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     QP939_09055
DNA repair and recombination proteins [BR:anw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      QP939_09055
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 SAM_EPH
Other DBs
NCBI-ProteinID: WIV58755
LinkDB
Position
complement(1894043..1895113)
AA seq 356 aa
MLISQRPALGEETVNETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKELVVSSEEDEPVTMYLRKQGPGEVTAADIVPPAGVTVHN
QDLHIASLNGKGKLEIELVVERGRGYVPALQNKQAGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKPSITPRDAVASAGKTLVELFGLARELNVDAEGIEIGPSPQE
ADTIAAYAMPIEDLDLTVRSYNCLKREGIHTVGELVSRSEADLLDIRNFGAKSIDEVKLK
LVGLGLALKDSPPGFDPTAAAASYDGEGWSEGVGGIADGISDGHDDGQDYAETEQL
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgctgatttcccagcggccggctctcggcgaagagacggtcaacgagacccgctcccgg
ttcaccatcgaaccgctggagcccggcttcggctacacgctcggcaactcgctgcggcgc
acgctgctgtcgtccatcccgggcgcggccgtgacgagcatccgcatcgacggcgtgctg
cacgagttcaccaccgttcccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aaggagctcgtggtgtcctcggaagaggacgagccggtcaccatgtacctgcgcaagcag
ggcccgggtgaggtcacggctgccgacatcgtgccgccggccggcgtcaccgtgcacaac
caggacctgcacatcgcgtcgctgaacggcaagggcaagctcgagatcgagctcgtcgtc
gagcgcggccgcggttacgttcccgccctgcagaacaagcaggcgggcgcggagatcggc
cggatcccggtcgactcgatctactcgccggtcctgaaggtgacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctggacgtcgagaccaagccg
tcgatcacgccgcgcgacgcggtcgcgtcggccggcaagacgctggtggagctgttcggt
ctcgcccgcgagctgaacgtcgacgccgagggcatcgagatcggcccgtcgccgcaggag
gcggacaccatcgccgcctacgcgatgccgatcgaggacctggacctcaccgtccggtcg
tacaactgcctcaagcgcgagggcatccacacggtgggcgagctggtctcgcgcagcgag
gcggacctgctcgacatccgcaacttcggcgccaagtcgatcgacgaggtcaagctcaag
ctcgtcggcctcggcctcgcgctgaaggacagcccgcccgggttcgacccgaccgcggcg
gccgccagctacgacggcgaaggctggtcggagggtgtcggtgggatcgccgacggcatt
tcggacggccacgacgatggccaggactacgcagagaccgagcagctctga

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