Amycolatopsis nalaikhensis: QP939_29760
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Entry
QP939_29760 CDS
T10497
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
anw Amycolatopsis nalaikhensis
Pathway
anw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QP939_29760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anw03019
]
QP939_29760
03400 DNA repair and recombination proteins [BR:
anw03400
]
QP939_29760
Enzymes [BR:
anw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QP939_29760
Messenger RNA biogenesis [BR:
anw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QP939_29760
DNA repair and recombination proteins [BR:
anw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QP939_29760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_30
SWI2_SNF2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WIV53101
LinkDB
All DBs
Position
complement(6090294..6092405)
Genome browser
AA seq
703 aa
AA seq
DB search
MDTTSTASALRDRAETLLRALAGDSAKLREDQWTAIEALVAQRRRALVVQRTGWGKSAVY
FLATALLREQGSGPTVIVSPLLALMRNQISAAARAGIHAATMNSANAQEWDQVQAAVAAG
EVDVLLVSPERLNNPDFRDNVLPKLTASTGLLVVDEAHCISDWGHDFRPDYRRLRTLLGD
LPDGVPVLATTATANDRVVTDVAEQLGLGTGADTLVLRGSLDRESLRLSVCRLPTSQARL
AWLAEHLAELPGSGIIYTLTVAAAHDVASLLKDRGYPVAAYTGKTDPADRQAAEDDLLGN
RVKALVATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRGVERAEVVLLPGEEDK
AIWAYFGSLAFPDELRVTQVLNTLAYADRPLSTAALEPSVELSRSRLEMVLKVLDVDGAV
RRVKGGWTSTGEEWQYDRGRYQRVAEARDREQEAMLGYLATEGCRMEYLRRQLDDPEAAP
CGRCDNCTGDHWDTTVADDVAEATRERLQRPGVEVAPRKQWPTGMSSLDIPVSGRISADD
QAEPGQVLGRLTDVGWGNRLRELVGPQAKDAEVPDSVFKACVQVLAGWQWTERPVAVVAV
PSSTRPQLVYSLATRLAEIGRLDFLGALDAEGPPPRQANSAQRLADLWRRMSMPADLAAT
LPAGPILLVDDVIDTGWTMTLAARLLRRAGSPAVLPFALASTA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtggacaccaccagcaccgcctcagcactccgggaccgcgccgaaaccctcctccgggca
ttggccggcgactcggcgaagctgcgcgaagaccagtggacggccatcgaggcactggtc
gcgcagcgccgccgcgcgctggtcgtgcagcgcaccggctggggcaagtcggcggtgtac
ttcctggccacggcgctgctgcgggaacagggcagcgggccgacggtgatcgtctcgccg
ctgctcgcgctgatgcgcaaccagatctcggcggcggcgcgggccgggatccacgcggcg
accatgaactcggcgaacgcccaggagtgggaccaggtccaggcggcggtcgcggcgggc
gaggtggacgtcctgctggtcagccccgaacggctgaacaacccggacttccgcgacaac
gtgctgccgaagctgaccgcgagcaccggcctgctggtggtcgacgaggcgcactgcatc
tccgactggggccacgacttccggcccgactaccggcgcctgcggacgttgctgggcgac
ctgcccgacggcgtgccggtgctggcgaccacggcgacggcgaacgaccgcgtcgtcacc
gacgtcgccgagcagctcggcctcggcaccggcgccgacacgctggtgctgcgcggcagc
ctcgaccgggaaagcctgcggctgtcggtgtgccggctgccgacgtcgcaggcgcggctg
gcgtggctcgccgagcacctggccgagctgcccggctccgggatcatctacacgctgacc
gtggcggcggcgcacgacgtcgcgtcgctgctgaaggaccgcggctacccggtggcggcc
tacaccggcaagaccgacccggccgaccgtcaggcggccgaggacgacctgctcggcaac
cgcgtcaaagccctggtcgcgacgtccgcactgggcatggggttcgacaagccggacctc
gggttcgtcgtgcacctcggtgctccgtcgtcgccgatcgcgtactaccagcaggtcggc
cgcgccgggcgtggcgtcgagcgcgccgaggtcgtgctgctgcccggcgaggaggacaag
gcgatctgggcgtacttcggctcgctcgcgttcccggacgagctgcgggtgacccaggtg
ctgaacacgctggcgtacgccgaccgtccattgtcgacggccgcgctcgagccgtcggtg
gagctttcccgctcccgcctggagatggtgctcaaggtgctggacgtcgacggcgcggtg
cggcgcgtgaagggcggctggacgagcacgggtgaggagtggcagtacgaccgcgggcgg
taccagcgcgtcgccgaggcccgtgaccgcgagcaggaggcgatgctcggctacctcgcg
accgagggttgccggatggagtacctgcggcgccagctcgacgaccccgaggcggcgccg
tgcgggcggtgcgacaactgcaccggcgaccactgggacaccacggtggccgacgacgtc
gccgaggcgacccgcgaacggctgcagcgcccgggggtcgaggtcgcgccccggaagcag
tggcccaccggaatgtcctctttggacatcccggtctccggccggatctcggccgacgac
caggccgagccgggccaggtgctcgggcggctcaccgacgtcggctggggcaaccggctg
cgggagctcgtcgggccgcaggcgaaggacgccgaggtgccggactcggtgttcaaggcg
tgcgtccaggtgctcgccgggtggcagtggacggaacggccggtggcggtggtcgcggtg
ccttcctcgacgcggccgcagctcgtgtacagcctcgccacgcggctggccgagatcggc
aggctggacttcctcggcgcgctcgacgccgagggcccgccgccgaggcaggcgaacagc
gcgcaacggctggccgacctgtggcggcggatgagcatgcccgccgacctcgcggcgacg
ttgcccgccgggccgatcctgctggtggacgacgtcatcgacacgggctggacgatgacg
ctggccgcccggttgctgcggcgggccgggtccccggcggtgttgcccttcgccttggcc
agtacggcatag
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