KEGG   Amycolatopsis nalaikhensis: QP939_30960
Entry
QP939_30960       CDS       T10497                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
anw  Amycolatopsis nalaikhensis
Brite
KEGG Orthology (KO) [BR:anw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:anw03016]
    QP939_30960 (truB)
Enzymes [BR:anw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     QP939_30960 (truB)
Transfer RNA biogenesis [BR:anw03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    QP939_30960 (truB)
 Prokaryotic type
    QP939_30960 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 LPP TruB-C_2 DKCLD
Other DBs
NCBI-ProteinID: WIV53318
LinkDB
Position
6317431..6318336
AA seq 301 aa
MSSPKPPRRPAPPPGLLIVDKPAGMTSHDVVARARRIMGTRKVGHAGTLDPMATGVLVLG
IERATKLLGHLALDRKTYLATLSLGSSTTTDDAEGEVLSRAETKNVTDDDIANGVEKLTG
DIQQVPSAVSAVKIDGKRAYARVRAGEDVVIPARPVTVHRFDVLAVRHEEDHVEVDAVVE
CSSGTYVRALARDLGADLGVGGHLKALRRTTVGPFTLAKARTLDQLEETPELSLDLDAAV
AAAFPRRDVDAATAKAVRHGQRIPAAGLEGTYGLFGPDGRVLALAVDEQGVSRAVVVLLP
A
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgtcgagccccaaaccgccccgccgtcccgccccgccgcccggtctgctgatcgtcgac
aagcccgccggcatgacgtcccacgacgtcgtcgcgcgtgcccgccgcatcatgggcacc
cgcaaggtcgggcacgccggcacgctcgacccgatggcgaccggcgtgctggtgctcggc
atcgagcgcgccaccaagctcctcggccacctggcgctggaccgcaagacgtacctggcc
accctcagcctcggcagcagcaccacgaccgacgacgccgagggcgaggtcctgagccgg
gccgagacgaagaacgtcaccgacgacgacatcgcgaacggcgtcgagaagctgaccggc
gacatccagcaggtgcccagcgcggtcagcgcggtcaagatcgacggcaagcgcgcctac
gcccgcgtccgcgcgggcgaggacgtggtcatcccggcccgcccggtcaccgtgcaccgc
ttcgacgtgctggccgtgcgccacgaagaggaccacgtcgaggtcgacgccgtcgtcgag
tgctcgtccggcacctacgtccgcgcgctggcccgcgacctcggcgccgacctcggcgtc
ggcggtcacctcaaggcgctgcgccgcaccacggtcgggccgttcacgctggccaaggcg
cgcaccctcgaccagctcgaagaaacccccgaactgagcctggacctcgacgccgccgtc
gccgcggccttcccgcgccgcgacgtcgacgcggcgacggcgaaggcggtccgccacggc
cagcgcatccccgcggccgggctcgagggcacctacgggctgttcgggccggacggccgg
gtgctcgcgctggcggtcgacgaacaaggcgtgtcccgcgcggtggtcgtgttgctgccc
gcctag

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