KEGG   Amycolatopsis nalaikhensis: QP939_41545
Entry
QP939_41545       CDS       T10497                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
anw  Amycolatopsis nalaikhensis
Pathway
anw00040  Pentose and glucuronate interconversions
anw01100  Metabolic pathways
anw02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:anw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    QP939_41545
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QP939_41545
Enzymes [BR:anw01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     QP939_41545
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: WIV55250
LinkDB
Position
complement(8556666..8557949)
AA seq 427 aa
MRWKAFAGCLALLALTLTAAPASAHGRDPGRVVLGPRDGWAAATTGTTGGAAAARADVHT
VTKRSELAAALAAHPGAPKIIYVRGTIEGNVDARDRPMSCADFADPGYSLPAYLAAYDPA
TWGKVEPSGPLEEARARSQANQAAQVVLDVGPDTTIVGLGAATLHGLTLRVTGDNVILRN
LVFADAHDCFPQWDPLDGADGNWNSEYDNLDLVGATHVWVDHNEFSDGGNTSQPKYFGRK
YEVHDGLLDIVNGSDLVTVSYNRLHDHDKTMLIGNTDKPTYDVGKLRVSVHHNLFSEIGQ
RAPRVRYGQVHVYDNLYAVRDPAAYTYSIGVGVESRIYAENNFFRLPAAVPLGALVEYWK
GTVLHATGTLAVTGSSWPRPVDLLAEYNAANDPDLGPDVGWTPVLVDRLDPAWEVPARVL
SGAGPGR
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgcgctggaaggctttcgcggggtgcctggccctgctcgccctgacgctgaccgcggca
cccgcgtcggcgcacgggcgcgaccccggccgggtcgtgctcggcccgcgggacggctgg
gccgcggcgaccaccgggacgaccggaggtgcggccgccgcgcgtgccgacgtccacaca
gtcaccaaacgctcggagctcgccgccgcgctggccgcgcacccgggcgcgccgaagatc
atctacgtccgcggcacgatcgagggcaacgtcgacgcccgggaccggccgatgagctgc
gccgacttcgccgaccccggctacagcctgcccgcctacctggcggcctacgacccggcg
acctggggcaaggtcgagccgtcgggaccgctggaggaggcacgggcgcgctcgcaggcc
aaccaggccgcgcaggtggtgctcgacgtcggtccggacaccacgatcgtcggcctcggc
gcggccaccctgcacgggctcaccctgcgcgtcaccggggacaacgtgatcctccggaac
ctggtcttcgccgacgcgcacgactgcttcccgcagtgggacccgctcgacggcgccgac
ggcaactggaactccgagtacgacaacctcgacctcgtcggcgcgacgcacgtctgggtc
gaccacaacgagttcagcgacggcggcaacaccagccagcccaagtacttcggccggaag
tacgaagtccacgacggactcttggacatcgtcaacggctcggacctcgtgacggtgtcc
tacaaccgcctgcacgaccacgacaagaccatgctgatcggcaacaccgacaagcccacc
tacgacgtcgggaagctgcgggtttccgtgcaccacaacctcttctcggagatcggccag
cgcgcgccacgcgtgcggtacgggcaggtgcacgtgtacgacaacctgtacgcggtccgg
gatccggccgcctacacgtattcgatcggcgtcggcgtcgaatcgcggatctacgcggag
aacaacttcttccggctccccgccgcggtgccgctgggcgcgctggtcgagtactggaag
gggacggtgctgcacgcgaccggaactctcgccgtcacgggctcgtcgtggccgcggccg
gtcgacctgctggccgagtacaacgcggccaacgacccggacctcgggcccgacgtcggc
tggaccccggtgctggtggaccggctcgacccggcgtgggaagtccccgcgcgggtgctg
tccggcgccggtcccggtcggtag

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