Amycolatopsis nalaikhensis: QP939_46590
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Entry
QP939_46590 CDS
T10497
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
anw Amycolatopsis nalaikhensis
Brite
KEGG Orthology (KO) [BR:
anw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anw03000
]
QP939_46590
Transcription factors [BR:
anw03000
]
Prokaryotic type
Helix-turn-helix
Other families
QP939_46590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
AAA
HTH_50
AAA_22
AAA_16
HTH_22
nSTAND3
HVO_A0261_N
Sigma54_activat
IstB_IS21
BRCA-2_helical
HTH_30
AAA_5
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
WIV56191
UniProt:
A0ABY8XKQ1
LinkDB
All DBs
Position
9596260..9598038
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AA seq
592 aa
AA seq
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MTTREDRPMRDLREMFLSSPLPEVPGVRDVISASWRRAVENRVAADAPDPVFVTDRDEES
LLAHCATPVLANLSEEMANHPVAILLTDANGLVVSRVSTDGALTSGLDSISLAPGYSYAE
ESVGTNGIGTALECQKSVLVSGFEHFNSSLTEFECAGAPIIHPIRGHLAGVLDLTSWADT
SGPLLLTLARTTAKRIEEAMLANTGARELSLFREYLASCQRGSGAILAVNEDVVMVNSHA
EELYDVTDRAALITHTADLVGSTKPVTVVADLPSGTIARLEYRPVYSGTTLAGGVFRVKN
QAHSRRRATRKDLQLPGLVGANPQWRQACATADGSFADGSWLVLSGESGVGKTAMARAVA
VRHGRRPVLVDCTAVADGYEEWVEDLADDVTRGEPPVVVIRRADALTEDGLHRLTDLLTG
WQGAPPDQAPAWLVATLGDEPANPDVQGRLMPFFAHTVEVPPLRHRLDDLQRLVPHLLAR
HAANRPLTVSDGCLRQLMRLPWAGNVRQLDQVLADAARRRRSGTIEVTDLPAECRTFTRR
QLTKLESIERDAIVRSLAANRGNKEHAAADLGMSRATIYRKIRAFGIVADHS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgcgagaagaccggccgatgcgcgacctgcgggagatgttcctgtcctccccg
ctgcccgaggttcccggcgtgcgggacgtcatcagcgcctcctggcgccgggcggtcgaa
aaccgcgtcgccgccgacgcccccgacccggttttcgtcaccgaccgcgacgaagagagc
ctgctggcgcactgcgcgacacccgttctggcgaacctttcggaggagatggccaaccac
cccgtggcgatcctgctgacggacgcgaacggtctcgtggtcagccgcgtgagcaccgac
ggcgccttgacctccgggctggacagcatctcgctcgcgcccggctacagctacgccgag
gagtcggtggggaccaacgggatcggcaccgcgctcgaatgccagaagtcggtcctggtg
tcgggtttcgagcacttcaacagcagcctcaccgagttcgagtgcgcgggcgcgccgatc
attcacccgatccggggacacctggccggggtgctcgacctgacgtcctgggcggacacg
tccggcccgctgctcctgacgctggcgcgcacgacggccaagcggatcgaggaggcgatg
ctggccaacaccggcgcgcgggagctcagcctgttccgcgagtacctcgcgtcctgccag
cgcggctccggggcgatcctggccgtcaacgaggacgtcgtgatggtcaacagccacgcc
gaggagctctacgacgtgaccgaccgcgccgcgctcatcacccacacggcggacctggtc
gggtcgacgaagccggtgaccgtcgtcgccgacctgccgtcgggcaccatcgcccggttg
gagtaccggccggtctacagcggcacgaccctcgccggcggcgtgttccgcgtcaagaac
caggcccactcccgccgccgggccacgcgcaaggacctgcagctccccggcctcgtgggc
gccaacccgcagtggcggcaggcgtgcgccacggccgacggcagcttcgccgacgggagc
tggctggtcctgagcggcgaaagcggcgtcggcaagacggcgatggcgcgggccgtcgcg
gtccggcacgggcgccgtccggtgctcgtcgactgcacggccgtcgcggacggctacgag
gagtgggtcgaggacctggccgacgacgtgacccgcggcgaaccgccggtggtcgtcatc
cggcgcgccgacgccctcaccgaggacggcctgcaccggctcaccgacctgctgaccggc
tggcagggcgcaccgccggaccaggcgccggcctggctcgtggcgacgctcggtgacgaa
ccggcgaacccggacgtccagggccgcctgatgccgttcttcgcgcacacggtcgaggtc
ccgccgctgcgccaccggctcgacgacctgcagcgcctggtcccccacctgctcgcccgc
cacgcggcgaaccggccgctgacggtgtcggacggctgcctgcgccagttgatgcggctg
ccgtgggcgggcaacgtccgccagctggaccaggtcctcgccgacgccgcccgccgccgc
cggagcggcacgatcgaggtgacggacctcccggcggagtgccgcacgttcacccgccgc
cagctgacgaagctggagtcgatcgagcgcgacgcgatagtccgcagcctggcggccaac
cgcggcaacaaggaacacgcggcggcggacctgggcatgtcccgggcgacgatctaccgc
aagatccgcgcgttcggcatcgtggcggaccattcgtag
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