Aneurinibacillus sp. XH2: ACH33_01350
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Entry
ACH33_01350 CDS
T04247
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
anx
Aneurinibacillus sp. XH2
Pathway
anx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACH33_01350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anx03021
]
ACH33_01350
03019 Messenger RNA biogenesis [BR:
anx03019
]
ACH33_01350
Transcription machinery [BR:
anx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACH33_01350
Messenger RNA biogenesis [BR:
anx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACH33_01350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
S1CSD-TOTE-2
AAA_22
AAA
AAA_25
Mor
NACHT
NB-ARC
Spore_III_AA
SAP_new25
Motif
Other DBs
NCBI-ProteinID:
AMA74567
LinkDB
All DBs
Position
272521..273801
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AA seq
426 aa
AA seq
DB search
MEMNLAQLEEMKLTELYKLAREYQIPYYGTFKKRELIFAILQAQAERQGHMFMEGVLDTH
PDGFGFLRPINYLPSAEDIYISASQIRRFDLRTGDKVSGKVRPPKENERYFGLLHVDAVN
GEPPETSPERLHFPALTPLYPQKKMVLETSPTSISSRIIDLIAPVGFGQRGLIVAPPKAG
KTVLLKEIANSIATNHPQVELIVLLIDERPEEVTDMQRSVKGEVVSSTFDELPENHIKVA
ELVLERALRLVEHKKDVVILLDSITRLARAYNLTVPASGRTLSGGIDPAAFHRPKRFFGS
ARNVEEGGSLTILATALVETGSRMDDVIYEEFKGTGNMELHLDRKLAERRVYPAIDIRRS
GTRREELLFSKEELDKIWALRKFIHDNNDFTEAFIKKLSETKTNQEFLDSLVLDDIKKIG
ATKARA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgaaccttgcgcaattagaagaaatgaagttaacggaactctataagctggcg
agagaataccagattccttattatggaacattcaagaaacgagaactaatttttgcgatt
ttgcaagcgcaggcagagcggcaaggtcacatgtttatggaaggggtgctggatacgcac
cccgacggctttggcttcttacgtcctatcaattatcttccaagcgcggaggatatatat
atttcggcttcgcaaatccggcgctttgatttacgaaccggcgacaaagtatcagggaag
gtaaggccgccgaaagaaaatgagcggtatttcggattgctgcatgttgacgcggtcaac
ggcgagcctccagaaacctcacccgaacgtttgcatttcccggcgctaacgcctctttat
cctcagaagaagatggtgctcgaaacatcgcctaccagcatttcttcccgtattattgat
ttaatagcgcctgtcggcttcggacagcgcgggctgattgttgctcctccgaaagccggg
aaaacggtgttgttgaaagaaatcgcgaacagcatcgcaaccaaccatcctcaagtcgaa
ttgattgttctactaattgatgagagaccggaagaagtaactgatatgcagcgctcagtc
aaaggggaagtcgtaagttccacatttgacgaattaccggaaaatcatattaaggtggcc
gaacttgtgctggagcgcgccctgcgcctagttgagcacaaaaaagatgtagttatcctg
ttggacagtattacccgtttggcgcgcgcgtacaacctaaccgtgccggcgagtggacgt
acgttgtccgggggtatcgatcctgctgcattccaccgtccgaagcgattctttggatcg
gcgcggaacgtggaagaaggcggcagcctgacgattcttgccaccgcgctcgtagagacg
ggttcgcgcatggatgacgtaatctatgaggaatttaaaggtacgggtaatatggaactt
cacctggatcgcaagctggccgagcgccgcgtgtatccggcgattgacatccgccgttcc
ggcacacgccgcgaggaattgttattcagcaaagaagagcttgataaaatctgggcgctc
cgcaaatttattcatgataacaatgacttcaccgaagccttcattaaaaagcttagcgaa
acgaaaaccaaccaggaatttcttgattctcttgtacttgatgacattaaaaaaataggc
gcaactaaagcgcgggcttaa
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