Aneurinibacillus sp. XH2: ACH33_17885
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Entry
ACH33_17885 CDS
T04247
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
anx
Aneurinibacillus sp. XH2
Pathway
anx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACH33_17885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anx03021
]
ACH33_17885
03400 DNA repair and recombination proteins [BR:
anx03400
]
ACH33_17885
Enzymes [BR:
anx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACH33_17885
Transcription machinery [BR:
anx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACH33_17885
DNA repair and recombination proteins [BR:
anx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACH33_17885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AMA74458
LinkDB
All DBs
Position
complement(3556780..3560421)
Genome browser
AA seq
1213 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVIDPGETPLEKKQLLSEKEYRNYREKYGSSFTAMMGAEAIKRLLA
EIDLDKEVDCLKEELKSAQGQRRNRVIKRLEVLEAFRNSGNRPEWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKMYQCGLPKE
MALELFKPFVMKELVAKGLAHNIKSAKRKVERVHPEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGTYYLTMEDKTSKGEGKVFSNPNQAIAAYANGHITLHARIALP
PKSLNKTSFTPEQFAAPLMVTTVGKLIFNEIFPPELPYINEPTKENLQKKVPDKFFIFEK
GTNVREFLEKLPEQDAVKKGYLGTIIAECFRRFGTTQTSIILDKIKENGFKYSTQAGITV
AVADIKTPPEKQQILEEAEKKVQSVMQQYRRGLITENERYDRVISIWSKAKDDVTKVLMA
SLDKFNAINMMATSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYFI
STHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGVVATALRDGNEIIEE
LQDRIVGRYSFQTVRHPETGEIIVGRNQLIDEKIAEEIVAAGITEVNIRSVIGCRTQHGV
CRKCYGRNLATGNVVDIGESVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQE
LFEARNPKGQAVITEIEGEVIDIREGKDRREVEIRGETENKVYQIPYGSRLKVFVGSKVD
LGEELTEGSIDPKEMLKIRGMRGVQYYILQEVQKVYRMQGVEINDKHIEVMIRQMLRKVR
IIDSGDTELLPGSYVEIHEFEEANKKALWDGKQPAVARPVLLGITKASLETDSFLSAASF
QETTRVLTDAAIKGKVDRLLGLKENVIIGKLLPAGTGMTRYRNIALKHELMPAEEVAEEA
LDESQLKDVILEK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgtcaataattttgaatatatgaagatcggccttgcatcacccgataagatt
cgttcctggtcttacggagaggtcaaaaaaccggaaaccattaactaccggaccttaaaa
ccggaaaaagaaggcttgttctgcgagaaaattttcgggccgacaaaagactgggaatgt
cattgcggaaagtacaaacgtgttcgttataaaggcgtagtttgcgatcgttgcggcgtt
gaagtaacccgtgcgaaagtgcgccgggagcgcatggggcacattgaattggctgcccct
gtctcccatatctggtattttaaagggattccgagccgtatgggtcttgtgcttgacatg
tccccacgctctctagaagaggttatctatttcgcatcttatgttgttatcgatccaggc
gaaacgccgcttgagaaaaagcaattgctttctgagaaagagtaccgcaactatcgcgag
aagtacggttcttcttttaccgctatgatgggcgcagaagcgattaagcgtctgcttgcg
gaaatcgaccttgataaagaagtggactgcttaaaagaggagctgaaatcagcgcaaggc
cagcgccggaaccgtgtgatcaagcggttggaagtattggaggcatttcgtaattctgga
aaccgtccggaatggatggtgttggatgtgttgccggttattccgccagaacttcgtccg
atggtgcaactggacggcggccgttttgcaacctccgatttgaacgatttgtatcgccgg
gttattaaccggaataaccgcttaaagcgtttgcttgatcttggtgcgccggatatcatt
gtacagaatgagaagcgtatgttacaggaagcggtagacgctctgatagacaatggccgt
cgcggccgtcctgtaaccgggccgggcaatcgtccgctgaagtctctcagccatatgctg
aaaggtaaacaggggcgttttcggcaaaacctgcttggtaagcgtgtggactactctggg
cgttccgttattgtcgtaggcccgcagttgaaaatgtaccagtgcggtttgccaaaagaa
atggcgctagaattgttcaagccttttgtcatgaaagagcttgtcgcaaaaggtcttgcg
cacaatattaaatctgcgaagcgtaaagtggaacgcgtgcatccggaagtctgggatgtt
ctcgaggatgtaatcaaagaacacccggttcttttaaatcgtgctcccacattgcataga
ctcggcattcaggcttttgaacccacgcttgttgaggggcgtgcgattcggttgcatccg
ctcgtatgtacggcatataatgccgactttgacggtgaccagatggctgtacacgttcca
ttgtctgcggaagcgcaggcggaagcgcgtctgctgatgcttgcggcgcagaacatcctt
aacccgaaagacggcaagccggttgttacgccgtcgcaggacatggtacttggcacgtac
tatctgacgatggaagataagacttctaaaggagaaggcaaagttttctccaatccgaat
caggcgatcgcggcttatgcgaatggacatattacacttcatgcccgtatcgctctgccg
ccgaagagcctgaacaaaacttccttcacaccggaacaatttgcggctccgttgatggta
acaacggtcggaaaattaattttcaatgaaattttcccgcctgagctaccatatattaat
gagccgacgaaagaaaatcttcagaagaaagtgccggataagttctttatttttgaaaaa
ggtacgaacgtgcgcgaattcctagagaagttgcctgagcaagacgcggtcaaaaaaggg
tatctaggaacgattatcgctgaatgcttccgtcgcttcggcacgacgcagacatcgatc
atactcgacaaaattaaggagaatggttttaaatattccacgcaggctggtattactgtt
gctgttgccgacatcaaaactccgccagagaagcaacaaattctcgaagaagcggagaaa
aaagttcaatcggttatgcagcaatatcgtcgcggtttaattacagaaaacgagcgttac
gaccgcgttatcagcatctggagcaaagcaaaggacgatgttacgaaagtgcttatggcg
tcgcttgataagtttaacgccattaatatgatggcgacatccggcgcccgtggtaacgtg
tcacagattacacagcttgccggcatgcgcggtcttatggcaaacccgtccggccgtatc
atcgaacttccgatcaagtccaacttccgcgaaggcttaactgtattggagtactttatt
tccacacatggtgcgcggaaaggtttggcagacacagcgttgcgtacagctgactcaggt
tacttaacccgtcgcctcgtcgacgttgcacaggatgtgattgtccgtgaagaggattgt
ggtacggataaaggcgttgtggcaactgcgcttcgtgacgggaatgaaatcattgaggaa
ttgcaggatcgaattgttgggcgttattcgttccaaacagtgcgccatccagaaacaggg
gaaattattgtcggtcgaaatcagctcattgatgaaaaaattgcggaagaaattgtggcc
gcaggtattacggaggtcaatatccgttccgttatcggttgccgtacgcagcatggtgta
tgccggaaatgctacggtcgtaatctggcgacgggcaatgtagtggatatcggtgaatct
gttggtattatcgcggctcaatctatcggtgagccaggtacgcagttaacgatgcgtaca
ttccacaccggtggtgttgccggcgatgacattacgcaaggtcttccgcgtatccaggag
ttgtttgaggcccggaatccgaaaggccaggctgttattaccgaaattgaaggtgaagtt
atcgacattcgcgaaggcaaagatcggcgcgaagtcgaaattcgcggggaaaccgagaat
aaagtatatcaaattccttacggttcccgtttgaaagtgttcgttggttccaaagtggat
cttggtgaagaattaaccgaaggctccattgacccgaaagaaatgcttaagatccgcggt
atgcgtggcgttcaatactatattttgcaggaagtacagaaagtatatcgtatgcagggt
gtagaaattaacgacaagcatattgaggttatgattcgccagatgctgcgcaaagtgcgt
atcattgacagcggggatactgaactcttgccaggttcttatgtggaaatccatgagttc
gaagaggcgaataagaaagcgctctgggatggaaaacagcctgcagtggcacgtccggtg
ctgcttggtatcacaaaagcgtcgcttgagaccgattcattcctgtctgcagcatcgttc
caggaaacaacgcgtgtccttactgatgctgccattaaaggaaaagttgaccgcttgtta
ggtctgaaggaaaatgttattataggtaagctgttgcctgcgggcacaggtatgactcgc
tatcgcaacattgctttgaagcatgaactcatgccggctgaagaagttgcggaagaggca
cttgatgaaagtcagttgaaagatgttatactggaaaaatag
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