Anaerococcus sp. AH8042_DFU013_CI05: ACKRLN_01620
Help
Entry
ACKRLN_01620 CDS
T11013
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
anz Anaerococcus sp. AH8042_DFU013_CI05
Brite
KEGG Orthology (KO) [BR:
anz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anz03032
]
ACKRLN_01620 (topA)
03400 DNA repair and recombination proteins [BR:
anz03400
]
ACKRLN_01620 (topA)
Enzymes [BR:
anz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACKRLN_01620 (topA)
DNA replication proteins [BR:
anz03032
]
Prokaryotic type
DNA Topoisomerases
ACKRLN_01620 (topA)
DNA repair and recombination proteins [BR:
anz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACKRLN_01620 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Auto_anti-p27
Rossmann-like_BshC
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
XOT99930
LinkDB
All DBs
Position
309929..311983
Genome browser
AA seq
684 aa
AA seq
DB search
MAKNLVIVESPTKARSIGKMLGSNYKVMATIGHLRDLPKSKFGVDIENNFEPEYIKVRGR
AKTINELKKEADKADKVYLATDPDREGEAISWHLEYLLGLDPDDKNRVEFHEITKENVKN
AIKTPRQIDQNLVDAQQARRVMDRIVGYEISPILWKRVKSGLSAGRVQSVALKLIVEKQK
EIDAFVPEEYWTITADHDYDNTKFISEFYGKPSKKVKISNESGADKVLDAIDKDNFKVVE
VKKTKKSRKPPKPYTTSTLQQDASNKLGYSTKYTMQLAQQLFEGIDVGDGSVGLISYMRT
DATRISSEIVGESLKYIKDKYGDKYAGKGNNHGGKKKGSQDAHEAIRPTSIFRDPISVKP
YLTDQQYKLYKLIWTRVVQSQMTDYEYLSTTINFDNNSLIFKSNGKITIFEGFNKISGGL
ENENILPELKGGDVISATKIKKDQHFTNPPARYTEASLVKVLEEFGIGRPSTYSATINQI
VNRNYVEYEGRSIYPTELGFTVNDFLQENFDDIINVEFTADMENQLDKIAEHKIYWKDVL
GNFYTGFEKDMKNVKKDDTDYKVKDEVLDEKCPKCGHALAIKHGRNGKFIGCTNFPECDF
TKSIVKTTGVTCPKCKTGEIIEKVSKKGKRFYACDNYPKCEYAVWDPPTGEKCPECGDLL
VHKKNRRVDEIRCANCDYIKEKKR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaatttagtgatagtagaatctccaacaaaagcaagatcaatcggcaagatg
ctaggaagcaattacaaggtaatggcgaccattggacatttgcgtgatttaccaaagtca
aaatttggtgtagatatagaaaataactttgaacctgaatatataaaagtaaggggcagg
gcaaaaactataaatgaacttaaaaaagaagcagataaggcggacaaagtttacttggca
actgacccggatagggaaggtgaagctataagctggcatttggaatatctattgggactt
gatccagatgataaaaatcgtgtggaatttcatgaaattaccaaagaaaatgtaaaaaat
gccataaaaactccaaggcaaattgaccaaaatctagtagatgctcaacaagctagaagg
gttatggataggatagtaggttatgaaattagtccgattttgtggaagcgagtaaaatct
ggactttcagctggccgtgtgcaatcagttgctttaaaattaattgtagaaaaacaaaaa
gaaatagatgcctttgtaccagaagaatactggacaatcacagctgaccatgattatgac
aatacaaaatttatatcagaattttatggtaagcctagcaaaaaggtaaaaatttcaaac
gagtctggggctgataaggtcttagatgccatagataaggacaattttaaggtagtagaa
gttaaaaagaccaaaaaatctcgtaaaccaccaaaaccttacacaacatcaacactccaa
caagatgcttcaaacaaattgggttattctacaaaatacaccatgcaattggcccaacaa
ctatttgaaggtatagatgtaggagatgggtctgttggtttgatttcttatatgagaact
gacgctacaagaatttcatcagaaattgtgggagagtctttaaaatatataaaagataag
tacggagataagtatgctggaaagggcaataatcatggcggcaagaaaaaaggcagccaa
gatgcccacgaagccatccgaccaacatcaatttttagagaccctatctcagtaaaacca
tatttaaccgatcaacaatataagctttacaaattgatttggacaagggttgttcaatcg
caaatgacagattatgaatatctatcaaccacaataaattttgataataatagcttaatt
tttaaatcaaatggtaaaatcactatttttgaaggatttaacaaaataagtgggggactt
gaaaatgaaaatatactcccagagcttaaagggggagatgtaatatctgctacaaaaata
aaaaaagaccaacactttacaaatccaccagcaagatatactgaagcaagtcttgtaaaa
gtccttgaagaatttggcattggccgtccttcaacttattcagctacgataaatcaaatt
gtaaatagaaactatgtagaatacgagggcaggtctatttatccaacagaacttggtttt
acggtaaatgactttttacaagaaaattttgatgacataataaatgtagaatttaccgca
gatatggaaaatcaattggataagattgccgaacataaaatatattggaaagacgtattg
ggcaatttctatactggttttgaaaaagacatgaaaaatgtcaaaaaagatgatacagat
tataaggtcaaagatgaagttttagatgaaaaatgtccaaaatgcggtcatgctctagct
ataaaacacggcagaaatggtaaatttatcggttgtaccaattttccagaatgtgatttt
acaaaatcaatagtaaaaactactggagttacttgtccaaaatgcaaaactggagaaatt
atcgaaaaagttagcaaaaagggtaaaagattttatgcctgtgataattatccaaaatgc
gaatatgcagtatgggatccaccaacaggagaaaagtgcccagaatgtggtgacctttta
gttcataagaaaaatagaagagtcgatgagataagatgtgctaactgtgattatataaaa
gaaaagaagagatga
DBGET
integrated database retrieval system
