Anaerococcus sp. AH8042_DFU013_CI05: ACKRLN_03110
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Entry
ACKRLN_03110 CDS
T11013
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
anz Anaerococcus sp. AH8042_DFU013_CI05
Pathway
anz03410
Base excision repair
anz03430
Mismatch repair
anz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACKRLN_03110
03430 Mismatch repair
ACKRLN_03110
03440 Homologous recombination
ACKRLN_03110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anz03400
]
ACKRLN_03110
DNA repair and recombination proteins [BR:
anz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACKRLN_03110
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACKRLN_03110
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACKRLN_03110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
HBD
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
XOU00216
LinkDB
All DBs
Position
574187..575362
Genome browser
AA seq
391 aa
AA seq
DB search
MINPKRIDQDYPFKDLCGAAVCFKLMAALFQKLDGDYEYLYGLLEYVAMGTICDIVSLTD
ENRIFVIEGLKRLNYTEKLGIKAVLEESSWMKEIDVYTLGFILGPTMNATGRLSSAKMAI
ELLMEEDIDRIYELAKELVELNNERKNLTQDGLDKCLEIIEENKYFEDDVIVVYEPSINE
SICGIVAGRIKEKYYRPTIILTDSNTESIAKGSGRSIESYNIYQEVLKYKENLESFGGHP
MACGLSIKLDIIDDLRKFLNDNSSLTDSQKQKIINIDKAIDISKLSLEFAESLEKLSPFG
KDFEKPIFADKNVDISQITMIGKDKKTLKMSLFKNGVYVNAIKFNAVDDYNYLRDKFNGQ
IEGKKIDVVYYPDINEFRGNRNLQLKLIDIR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgattaatcctaaaagaatagatcaagactatccattcaaggatttatgtggagctgca
gtttgttttaaattgatggcagccttattccaaaaattagatggagattatgaatatcta
tatggacttttagaatatgtagctatgggtactatttgtgatatagtatctcttactgat
gaaaacagaatttttgttatagaaggacttaaaagattaaattatactgaaaaacttgga
attaaagcagtacttgaagaaagttcttggatgaaagaaatcgatgtttatactctgggt
tttattttaggacctacaatgaatgctacaggtagactttcatcagcaaaaatggctata
gaacttctgatggaagaggatatagataggatttatgagcttgctaaggaattagttgaa
ttaaataacgaacgtaaaaatcttactcaagatgggcttgataaatgtctagaaatcata
gaagagaataaatattttgaagatgatgtaatagtagtttatgaaccatctataaatgag
tccatatgcggaattgtagcagggcgtataaaagaaaaatactacaggcctacaattata
ctgacggattcaaatacagaaagtattgctaagggatctggacgctctattgaatcttat
aatatttaccaagaagttttaaaatataaagaaaatcttgaatcatttggtggacatcct
atggcttgtggactttctataaagctagacattattgatgatttaaggaaatttttaaat
gacaattcatctcttacagattcacaaaaacaaaaaattataaacatagataaggcaatt
gatatctcaaagttgtctttagaatttgcagaaagtctagaaaaactttcaccatttgga
aaagattttgaaaaaccaatttttgctgataagaatgtagatatatcacaaattacaatg
attggaaaagataaaaaaactttaaaaatgtcactttttaaaaatggtgtttatgtaaat
gccatcaaatttaatgcagtagatgattataactatttacgcgataaatttaatggtcaa
atagaaggaaaaaaaattgatgtagtctattacccagatataaatgagtttagaggcaat
agaaatcttcagttaaaacttattgatattagatga
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