Anaerococcus sp. AH8042_DFU013_CI05: ACKRLN_03330
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Entry
ACKRLN_03330 CDS
T11013
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
anz Anaerococcus sp. AH8042_DFU013_CI05
Pathway
anz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACKRLN_03330 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anz03019
]
ACKRLN_03330 (rny)
Messenger RNA biogenesis [BR:
anz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACKRLN_03330 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
FBF1
Herpes_UL25
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
XOU00260
LinkDB
All DBs
Position
complement(614088..615629)
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AA seq
513 aa
AA seq
DB search
MDNPIVIIITVAFVLLAFILGFLYQKKSSEKKIGAADELSRQIIEDANRQAETLRRETLV
EAKDEISKIKLENDKKLSKRSDELDKKEARLFKKEESLDNRALLIDKKADQISSDQKRLK
QKEDSIDKLIEEQQLKLQNIAGLTNSEAKEIILNDVKKETVHETAKLIKEAEEKIKAESK
KMATEILATTIQRYAADQVAENTVSVVTLPNDEMKGRIIGREGRNIRAFEQLSGVDLIID
DTPEAVVISSFEPVRREIAKVALERLIQDGRINPSRIEETLQKAEDEVEQRIIEDGEQAV
EAAGVRNLHPQLVRLVGKMKFRTSYGQNIMKHSVEVAQLAGMLAEEIGADPQTARRSGLL
HDIGKSIDQEMEGTHVELGIEYATRYGENKYVINAIQSHHGEVEPNCVESILVQTADAIS
AARPGARRESLENYIKRLENLEAIANSYEGIDKSFALQAGRELRIMVKPDRITDDEMIVI
AREIAKRIEEELEYPGEIKVNVLRESNAIEYAR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggataatccaattgttataatcattactgtcgccttcgtattgttagcttttatttta
ggcttcctttatcagaaaaaatctagtgaaaaaaagattggcgctgcggatgagctcagt
cgtcaaatcatcgaagatgctaataggcaagcagaaacactacgtcgtgaaactcttgtt
gaagcaaaagatgaaatatctaaaataaaattagaaaatgataagaagttaagcaaaaga
agcgatgaactcgacaaaaaagaggctcgcttatttaaaaaagaagaaagtcttgacaat
agagctttattgattgacaaaaaagctgatcaaatctctagtgatcagaagaggttaaaa
caaaaagaagacagcattgataaactgattgaagaacaacagttgaaattgcaaaatatt
gcaggcctaacaaatagtgaagctaaagaaataattcttaatgacgtaaaaaaagaaacg
gtccacgaaactgcaaaattaattaaagaagctgaagaaaagattaaagctgaaagtaaa
aaaatggctacagaaatcctagctacaacaattcaaagatatgcagcagatcaagtagct
gaaaatacagtttcagtagtaactttaccaaatgatgaaatgaagggtcgtataattggc
cgtgaaggtagaaatatcagagccttcgaacaactatcaggcgtagacttaattatagat
gatactccagaagcggttgtaatttcatcttttgaaccagtacgtagagaaattgctaaa
gttgctttagaacgattaattcaggatggtcgtataaatccatctaggatagaagaaact
ttgcaaaaagcagaagatgaagtggaacaaagaataatcgaagatggtgaacaagctgtt
gaagcggctggagttcgtaatcttcatccacaacttgtaagacttgtaggtaaaatgaag
tttagaacaagttatggacaaaatattatgaaacactccgtagaagttgcacaacttgca
ggaatgcttgccgaagaaataggggcagatcctcaaacagctcgtcgtagtggactttta
catgatattggtaaatctatagaccaagagatggaaggtacacacgtagagttgggtata
gaatacgcaactagatatggcgaaaataaatatgttataaacgccattcaatcacaccat
ggagaagttgaaccaaattgtgtagaatccattttggtacaaacagctgatgctatatca
gcagcaagaccaggtgcacgtcgtgaaagtttagaaaactatattaaacgattagaaaac
ttagaagctatagctaattcttatgaaggtatagataaatcatttgccttacaagcgggt
agagaacttagaataatggttaagccagatagaataacagatgatgaaatgattgtaatt
gctagagagattgcaaaacgtatcgaagaagaattagaatatccaggagaaattaaagta
aacgtcttaagagaatcaaatgcaatagaatatgcaagataa
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