Anaerococcus sp. AH8042_DFU013_CI05: ACKRLN_05380
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Entry
ACKRLN_05380 CDS
T11013
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
anz Anaerococcus sp. AH8042_DFU013_CI05
Pathway
anz03030
DNA replication
anz03430
Mismatch repair
anz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACKRLN_05380
03430 Mismatch repair
ACKRLN_05380
03440 Homologous recombination
ACKRLN_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anz03032
]
ACKRLN_05380
03400 DNA repair and recombination proteins [BR:
anz03400
]
ACKRLN_05380
Enzymes [BR:
anz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACKRLN_05380
DNA replication proteins [BR:
anz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACKRLN_05380
DNA repair and recombination proteins [BR:
anz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACKRLN_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
DEDDh_C
Rv2179c-like
tRNA_anti-codon
HHH_3
tRNA_anti_2
DUF655
Zn_ribbon_8
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XOT98991
LinkDB
All DBs
Position
complement(1030678..1034802)
Genome browser
AA seq
1374 aa
AA seq
DB search
MKIDLSRFVDIKENEYTITNAIYYKNTNELKLTVESDLDHFDDKVRVELDDFLSFVTLTI
EFVNLSPDINEDVCGNEVEPDINEVEIIEDKDLGSKPKELVENISENCEQDTVSDLLNQK
EKDLQARISHAINLSHKEEKKEIEPVDGLDYGGKIKNDVIPIAEIYDKKGLRVSLIGTVY
NLDVFETKNHYFIYTFDLEDSTDAISCKIFSSEKNKEKLRLLRDGVAVQVEGVLNYDDYA
HEEIFTANILKEALISKKIDTAYEKRIELEVHTKMTNLDGFVDNTDILKVLTDWEWDAIG
ITDTETLQGLPDLYDAISKTGKKMLPGAELLLVEDELRILTNLSSNPVPTTKDIKDQEFV
VFDLETTGLSRFADKITEIGAVRIKNGEITEEFNELVNPEQLIPEKVIELTGITNEMVMD
KPKIDEVLPKFLEFAGDAILVGQNSDFDIGFVRENARNLRLNFDPIYMDTLPMARALFED
MGRFSLDKIAKKLNIPSFNHHRASDDARATAQIFIKMYEMIMKQDLDLSTINKFETHYPK
SKYENFSALVYAKNEIGLKNLYKLISKSRMKNFNNEAKTPISILKEHREGLIIGSGGHEG
MFFKYLLDGYPQEKIDELIELFDFFQVEPLGIFADEVSKGRVRNLDQVIDINKKIIELGK
ENNKLVAATGGVRYFKPDDYILRNILHKGQYFRYHENKPLYYLRTTNEMLEGFSYLDKDT
QRDIVIINPKKIADEIEDIRPIPPGTFPPVIDGSDEKLRNTCFEKAYSIYGNPLPKIVED
RLNKELNSIISNGYAVLYIIAKDLVGKSNEDGYLVGSRGSVGSSFAATMADITEVNPLSP
HYVCPNCKHSEFFEEDRLGAGIDYPDKDCPKCGTPLRKDGHNIPFEVFLGFEGDKEPDID
LNFAGEYQPTIHRFTEELFGEGKVFRAGTIGAIQDNTAFGYIKKYSEEYNEEFTNAQIRK
LQRGLKDVKRTTGQHPGGLIVVPNDIDIFDITPIQYPADDPAGDIKTTHFTYNMMHETLL
KLDLLGHDVPSIIRALQDLTGTDPLKIKMGDPNVMKIFSSTDPLDIKHDFSNNEIGTLGI
PEFGTNFVRGMLKETYPTKFSEMTRISGLSHGTDVWNNNARDLIMAKTTNFNEIISTRDD
IMNSLIQQGLDKKKSFQIMEIVRKGRTLSEEQVDYMRDNGVPEWYIESCLKIKYLFPKAH
AVAYCLMSYRIAYYKVYYPAAFYATYFNTKVNDFVYSIIINGLGSIQTALSSYKERFDLT
ARDENIRKVLEVAEEMYARDIKIDKADLYKSDAIKFILNEENGYLIPPLSSVDNVSEAMA
LDIVEEREKGEFISIEDFNKRTKVNKNALESLKTFGIIDGIQEENQMSLFDGMF
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgatttaagcagatttgttgacatcaaagaaaatgaatacactattacaaat
gcaatatactataaaaataccaatgaattaaaattaactgttgagtcagacctagatcat
tttgatgataaggtaagggtagagcttgatgattttttatcctttgtaacactcacaatt
gaatttgtaaacttatctccagatattaatgaggatgtatgtggcaatgaagttgagcct
gacataaacgaggtagaaattatcgaggataaggacttaggttcaaaaccaaaagagcta
gtagaaaatatttctgaaaattgtgagcaagatactgtctcagatcttctaaatcaaaaa
gaaaaagatcttcaggcccgtataagccatgctataaaccttagccataaggaagaaaaa
aaagaaatcgaacctgttgatggtcttgattatggtggcaagataaaaaatgatgtgatt
cctatagcagaaatttatgataaaaagggattacgtgtttcactaatcggtactgtttat
aatcttgatgtttttgaaaccaaaaatcattattttatctatacatttgacctagaggat
agcactgatgctatttcttgtaagatattctcatctgaaaaaaataaagaaaaactaaga
cttttaagagatggcgttgctgtacaagttgagggtgtcctaaattatgatgattatgcc
cacgaagaaatttttacagcgaatattttaaaagaagcacttatcagcaaaaaaatagat
accgcctatgaaaaaagaattgaattagaagttcatacaaagatgacaaatctagatggt
tttgtagacaatactgatattttaaaagttttaacagattgggaatgggatgcaatcggt
attacagatacagaaaccttgcaaggcttgccagacttatacgatgcaataagtaagact
ggaaagaaaatgttgccgggtgctgagcttttgcttgtagaagatgaattaagaatttta
accaatctttcatctaatcctgtcccaactacaaaagatataaaagaccaagaatttgta
gtatttgacttagaaactacaggtctttcaaggtttgccgataaaatcacagaaataggt
gctgttagaataaaaaatggagaaataacagaagaatttaatgagctagtaaatccagaa
caattaatcccagaaaaagttattgaactaactggtattacaaatgaaatggtaatggat
aagccaaaaatcgatgaggttttgcctaaatttttagaatttgcgggtgatgcaatccta
gtcggacaaaactcagactttgatattggttttgtaagagaaaacgctagaaatttaagg
ctaaattttgatcctatttatatggatactttgcctatggccagagctctctttgaagat
atgggtagattttccctagataagattgctaaaaaattaaatattccatcctttaaccac
cacagggcaagtgatgacgcaagagctacagctcaaatttttataaaaatgtatgaaatg
ataatgaagcaagatcttgatttatcaactataaataagtttgaaactcattatccaaag
tcaaaatatgaaaacttttctgcccttgtttatgcaaaaaatgaaatcggtctaaaaaac
ttatacaagctaatttcaaaatcaaggatgaaaaattttaataatgaagcaaaaacaccg
atatctatcttaaaagagcatagggaaggtcttataattggtagtggtggacatgaaggt
atgttttttaagtatctacttgatggctatccacaagaaaagattgatgaattaatagaa
ttatttgactttttccaagttgaaccacttggcatctttgccgatgaagtttctaaaggt
agggttaggaatcttgaccaagtcatagatataaataaaaaaataattgaactaggaaaa
gaaaacaataaattagtggcagctacaggtggggtaagatattttaaaccagatgattat
atactaagaaatatcctccataaaggccaatattttagatatcatgaaaacaaaccccta
tattatctaagaactacaaatgagatgttggaaggtttttcatatttggataaggatacg
caaagagatattgtaattatcaatcctaaaaaaattgctgatgagattgaggatatcaga
cctattcctcctggtactttcccaccagtaattgatgggtcagatgaaaaacttcgaaat
acttgttttgaaaaagcctactcaatctatggaaatccactgccaaaaattgtagaagat
agactaaacaaagagcttaattccataatttcaaatggatatgcagttctttatataatt
gcaaaagacctagtaggaaaatccaacgaagacggttacttagtaggatctagaggatcg
gttggttcttcttttgcggcaacaatggcagatattacagaagtaaatccattgtcgcct
cattatgtttgcccaaactgcaaacacagtgaattttttgaagaagataggttaggggcc
ggaatagattatccagataaggattgtccaaaatgtggtactcctttaagaaaagatggg
cacaatatcccatttgaagttttcttaggatttgagggagataaggagccagatatagat
ttaaactttgctggtgaataccaaccaaccatccatagatttactgaagaattatttggt
gaaggcaaggtatttcgcgcaggaaccataggagctatccaagataatactgcctttggt
tatatcaaaaaatattctgaagagtataatgaagaatttaccaatgctcaaattagaaaa
cttcaaagagggcttaaagatgtaaaaagaaccacaggccaacaccctggcggacttata
gtcgtgccaaatgatatagatatctttgatataacacctatccagtatccagcagatgat
ccggcaggtgatataaagacaacccattttacctacaatatgatgcatgaaactttatta
aagctcgacttactaggccatgatgtgccatccataatccgtgccttacaagatttaaca
ggtacagatccactaaaaataaaaatgggtgacccaaatgtaatgaagattttctcatca
acggatcccttagatataaaacatgatttttcaaataatgaaataggtaccttgggaatt
ccagaatttggtacaaattttgtaaggggaatgcttaaagaaacttatccaacaaagttt
tcagaaatgacccgtatatcagggctatcccatggtacagatgtttggaataataatgcc
agagacctaattatggcaaaaactacaaactttaatgaaatcatctcaacccgtgatgac
ataatgaactcccttatccagcaaggtcttgataagaaaaagtctttccaaatcatggaa
attgttagaaagggtaggactttatcagaagaacaagtagattatatgagagataacggt
gtacctgaatggtatatagaatcttgcctaaaaataaaatatctattcccaaaagctcat
gctgtagcctattgcttgatgagttatagaatagcttattataaggtttattatccagca
gcattttatgcaacatactttaatacaaaagttaatgattttgtatattcaataataata
aatggtctaggatctatccaaacagctctaagtagttataaagaaagatttgacttgact
gcaagagatgaaaatatcagaaaagtattagaagttgcagaagaaatgtatgccagagat
attaaaattgataaggctgatttgtacaaatcagatgctataaaatttatcttaaacgaa
gaaaatggatatttaattccacctttaagttctgtagacaatgtatcagaggctatggct
ctagatatagtagaagaacgagaaaagggagagttcatatctattgaagattttaataaa
agaacaaaagtaaataaaaatgccctagaaagcctaaaaacttttggaattatagatggc
atccaagaagaaaatcaaatgagcttatttgatgggatgttttag
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