Anaerococcus sp. AH8042_DFU013_CI05: ACKRLN_06190
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Entry
ACKRLN_06190 CDS
T11013
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
anz Anaerococcus sp. AH8042_DFU013_CI05
Pathway
anz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
anz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACKRLN_06190 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anz03400
]
ACKRLN_06190 (uvrB)
DNA repair and recombination proteins [BR:
anz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACKRLN_06190 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACKRLN_06190 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
ABC_tran
AAA_30
Spo0A_C
T2SSE
SWI2_SNF2
P-loop_SecA
AAA_22
NPHP3_N
AAA_7
DUF87
DUF8810
Motif
Other DBs
NCBI-ProteinID:
XOT99140
LinkDB
All DBs
Position
complement(1203667..1205634)
Genome browser
AA seq
655 aa
AA seq
DB search
MQKFKINSDYKPRGDQPEAIKTLANGLEQGKKHQILRGVTGSGKTFTMANIIEEVQRPTL
VLAHNKTLAYQLFTEFKEFFPDNAVEYFVSYYDYYQPEAYVAATDTYIAKDSSINDEIDK
MRHSATMALFERRDVIIVASVSCIYGLGDPIDYKELVVSLRPGQEIAPEEVMRKLIDVQY
VRNDIDFDRGTFRKRGDILDVFPAGFDQKAIRFEFFGDEIEEISEFDSLTGKVTAKLSHA
YIYPASHYATTSEKTERAIVTIEQELEEQLKYFNENNKLLEAQRLEQRTRYDIEMLKEIG
FCSGIENYSRHLSQRPAGSRPYTLIDYFPKDFVIMVDESHVSIPQVGGMYEGDRARKQNL
VDYGFRLPSALDNRPLKFNEFESLVNQAIYVSATPGPYEMDKTGGELVEQIIRPTGLLDP
IVEVRPTENQIDDLIEEIYKTTKKGDRALVTTLTKKMAEDLTTYLTENGIKVKYLHSDIK
TIERSEIIRELRLGEFDVLVGINLLREGLDIPEVSLIAILDADKEGFLRSETSLIQTIGR
AARNSEGHVIMYGDNITKSMKKAMDETARRRDIQMKFNEDHNITPQTIRKNIGEMIQVTK
AAEEAEIEEFNREDIDTIIINLESQMYKAAEELDFERAANIRDQIKHMKENFVGA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttaaaataaattctgattataaaccaaggggtgatcagccagaggctatc
aaaacccttgcaaatggtttagaacagggcaaaaaacatcaaatcctccgtggtgttaca
ggatctggtaagactttcaccatggcaaatataatagaagaagtccaaaggccaaccttg
gttttagctcacaataaaaccttggcctatcaactttttacagaatttaaagaatttttc
ccagataatgctgtggagtatttcgtttcttactatgattactaccaaccagaagcatat
gtggcagcaactgatacttatattgcaaaagactcatcaatcaatgatgagattgataag
atgcgccactcagcaactatggcactttttgaacgccgcgatgtaataattgtagcatca
gtttcttgtatttatggtttgggagatccgatagattataaggaacttgtagtttcacta
agacctggtcaagaaattgctccagaagaagttatgagaaaacttatcgatgttcaatat
gtgagaaatgatattgactttgataggggtacttttagaaaacgtggagacatccttgat
gtatttccagcaggttttgaccaaaaggcaattcgttttgagttttttggagatgaaatc
gaagaaatatctgaatttgattctctaactggtaaagtaactgcaaaattatcccacgcc
tacatttaccctgccagccactatgcaactactagtgaaaaaacagaacgtgctattgtg
actatcgagcaggaactagaagaacagttaaaatattttaacgaaaataataaattatta
gaagcccaaaggctagaacaaagaaccagatatgatatagaaatgctaaaagaaattggt
ttttgttcaggcattgaaaattactctagacatctaagtcaaaggccagcgggcagtaga
ccatacacattaatcgattatttcccaaaagattttgtaataatggtcgatgaatcccac
gtgtcaatccctcaagttgggggtatgtatgaaggagacagggctcgtaaacaaaaccta
gttgattatggttttaggttgccatcagcccttgataatagaccattaaaatttaatgag
tttgagtccttagtaaatcaagccatttacgtttcagcaactccaggcccatatgagatg
gataagactggtggagaattggttgaacaaattatccgtccaacaggactacttgatcca
atagttgaggtcagaccaacagaaaatcaaatagatgacttgattgaagaaatctataag
acaacaaaaaaaggcgacagggccttggttacaaccttgacaaaaaaaatggccgaggac
ttaactacttatcttacagaaaatggcatcaaggtaaaatatctgcactcagatataaaa
acgatagagcgatctgaaattatccgtgaattgcgtttgggagaatttgacgtcttagtc
ggcatcaaccttttaagagaaggtcttgatataccagaggtaagtctaattgcaatcctt
gatgctgataaggaaggatttttacgttcagaaacatcccttatccaaaccatcggccgt
gcagctagaaatagcgagggtcatgtaatcatgtatggggataatattacaaaatcgatg
aaaaaagccatggatgaaacagcccgccgccgtgacatacaaatgaaatttaatgaagac
cataacattaccccacaaactattagaaaaaatattggggaaatgattcaagttacaaag
gcagctgaagaagctgaaatagaagaatttaatagagaagatatagatacaataataatt
aatcttgaaagtcagatgtataaggccgcagaagagcttgactttgaacgagctgcaaac
atccgagatcagattaaacatatgaaagaaaatttcgtaggagcataa
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