Azoarcus olearius DQS-4: dqs_0778
Help
Entry
dqs_0778 CDS
T04423
Name
(GenBank) putative exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aoa
Azoarcus olearius DQS-4
Brite
KEGG Orthology (KO) [BR:
aoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoa03016
]
dqs_0778
Enzymes [BR:
aoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
dqs_0778
Transfer RNA biogenesis [BR:
aoa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
dqs_0778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ANQ83853
LinkDB
All DBs
Position
complement(805248..807149)
Genome browser
AA seq
633 aa
AA seq
DB search
MFVLFEEDGAFKAGTILAENDASLQVENTHGKRVKIKRANVLLNFREPSPADLLARAEAA
AEALDTEFLWEVCGDDEFGFAEFAAEYHGHAPSAVEAATVLLRLHSAPIWFHRKGRGRFR
KAPTEILQAALAGLEKKRQQALAIEEMRAELVEGRMPAAFTGMLPQILYRPDRNRIEVKA
LEAACVDTGLSAPRLLLKCGALASSFDYHFNRFLFEYFPEGLAFPDFEPPVVPADLPRAD
VAAFSIDDATTTEIDDAFSVTPRAGGGWRVGIHIAAPGLGCERGSTLDTIARRRLSTVYM
PGNKITMLPDQMVQAYTLAEGRDCPAVSLYLDVTADLAILGQESRLEIVPIVANLRHHDI
EPVFNDETVHEGVPDFPWKRELMLLWDLATVLEAGRGKPAANQNQVDHSFYVDWQTETAD
GPGYITIGKRLRGSPMDKLVAELMILANSTWGKLLDEAGVPGLYRVQSGGKVRMTTTAGP
HEGLGVDCYAWSSSPLRRYVDLVNQWQIISVLQGRPPAFAPKSAELMAALRDFELTYAAY
AEFQRQMERYWCVRWLRQHGAGPVDAIVLRDNVVRLEAVPLVFKVPSMPLQMPGSRVRLV
VEGSDLLDVEVEARFQQILSEPDPEDYAEFEGP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgctgttcgaagaggacggggccttcaaggccggaaccatcctcgctgaaaac
gatgcctccctgcaggtcgagaacacccacggcaaacgggtcaagatcaagcgcgccaac
gtgctgctgaacttccgcgagccgtcgccggccgacctgctggcacgcgccgaggcggcc
gccgaagccctcgacaccgagttcctgtgggaggtctgtggcgacgatgaattcggcttt
gccgagttcgccgccgaataccacggccacgcgccgagcgcggtggaagccgccaccgtg
ttgctgcgcctgcattcggcaccgatctggttccaccgcaagggccgcggccgcttccgc
aaggccccgacggagatcctgcaggccgcgctcgccgggctggagaagaagcgccagcag
gcgctggcgatcgaggagatgcgcgccgagctggtggaaggccgcatgcccgccgccttc
accggcatgctgccgcagatcctctaccgcccggaccgcaaccgcatcgaggtcaaggcg
ctggaagccgcctgcgtcgacaccgggctgtcggcgccgcgcctgctgctcaagtgcggc
gcgctggcgtcgagcttcgactaccacttcaaccgcttcctgttcgagtacttccccgaa
gggctggccttccccgacttcgagcccccggtcgtgcctgccgacctgccgcgcgccgat
gtcgccgcgttctcgatcgacgacgccaccaccaccgagatcgacgacgccttctcggtc
acgccgcgcgccggtggcggctggcgggtcggcatccacatcgccgcgccggggctgggc
tgcgagcgcggctccacgctcgacacgatcgcccgccggcgcctgtccacggtgtacatg
cccggcaacaagatcaccatgctgccggaccagatggtgcaggcctacacgctggccgag
ggccgtgactgccccgcggtgtcgctgtatctcgacgtcaccgccgacctcgccatcctc
ggccaggaaagccggctcgagatcgtccccatcgtcgccaacctgcgccaccacgacatc
gaaccggtgttcaacgacgaaaccgtgcatgagggcgtgcccgacttcccgtggaagcgc
gagctgatgctgttgtgggatctcgccaccgtgctcgaagccggacgcggcaagcccgcg
gccaaccagaaccaggtggaccacagcttctacgtcgattggcagaccgagaccgccgac
ggcccgggctacatcaccatcggcaagcgcctgcgcggctcgccgatggacaagctggtg
gccgagctgatgatcctggccaactccacctggggcaagctgctcgacgaggccggcgtg
ccggggctgtaccgcgtgcagagcggcggcaaggtgcgcatgaccaccaccgccggccca
cacgaaggcctgggggtggattgctacgcgtggtccagctcgccgctgcggcgctatgta
gacctggtgaaccagtggcagatcatctcggtgctgcaaggccgtccgcccgcgttcgcg
ccgaagtcggccgagctgatggccgcgctgcgcgacttcgaactcacctacgccgcgtat
gcggagttccagcgccagatggagcgctactggtgcgtgcgctggctgcgccagcacggc
gccggcccggtcgatgcgatcgtgctgcgcgacaacgtggtgcggctcgaggccgtgccg
ctggtgttcaaggtgccgtcgatgccgttgcagatgcccggcagccgcgtgcgcctggtg
gtggaaggcagcgacctgctcgatgtcgaggtcgaggcgcgcttccagcagatcctgtcc
gaacccgacccggaagactatgccgaattcgaaggcccgtga
DBGET
integrated database retrieval system
