Azoarcus olearius DQS-4: dqs_0834
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Entry
dqs_0834 CDS
T04423
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aoa
Azoarcus olearius DQS-4
Pathway
aoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
dqs_0834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoa03400
]
dqs_0834
Enzymes [BR:
aoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
dqs_0834
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
dqs_0834
DNA repair and recombination proteins [BR:
aoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
dqs_0834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ANQ83903
UniProt:
A1K3H1
LinkDB
All DBs
Position
859575..860393
Genome browser
AA seq
272 aa
AA seq
DB search
MPELPEVETTCRGVRPHVEGRRLSAVVVRNPRLRVPVPDNLAQLAAGQVLASVSRRAKYL
LLDFDRGGLVVHLGMSGSLRVVAAGEPAGKHDHLDLVFGETSLRLRDPRRFGMVLWQEGG
AVAHPLLAGLGPEPLDDAFDARYWVAATRGLRAPIKHVLMDGRRVVGVGNIYASESLFRS
RIHPLEPAGAIGPQRAARLVLAVKETLTEAIAAGGSTLRDFVGGDGRPGYFQQQYFAYDR
EGEACRVCGSVIRRFVSGQRATFFCPRCQRRA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtggaaaccacctgccgcggcgtgcgccctcatgtcgaaggt
cggcgcctgagcgcggtcgtggtgcgaaacccgcggctgcgcgtgccggtgccggacaac
cttgcccagctcgccgcgggccaggtgctcgccagcgtgtcgcggcgggcgaagtacctg
ttgctcgatttcgatcgcggcgggcttgtcgtgcatctcggcatgtcgggcagtctgcgg
gtggtcgcggcgggggagccggccggcaagcacgaccatctcgacctggtgttcggcgag
acttcgctgcggctgcgcgacccgcggcgtttcggcatggtgctctggcaggagggcggc
gccgtcgcccacccgctgctggccgggctggggccggagccgctggacgacgcgttcgat
gcgcgctactgggtggccgcgacccgcggcctgcgggcccccatcaagcatgtgctgatg
gatggccggcgggtggtcggcgtgggcaacatctacgcctccgaaagcctgttccggtcg
cgtatccatccgctggagccggcgggtgcgatcgggccgcagcgcgcggcgcggctggtg
ctggcggtgaaggaaacgctaaccgaagcgatcgccgcgggcggcagcaccctgcgcgat
ttcgtcggcggcgacggccggcccggatacttccagcagcagtatttcgcttacgaccgt
gaaggcgaagcctgccgcgtgtgcggcagcgtcatccgccgcttcgtcagcggccagcgc
gcgaccttcttctgtccgcgctgccagcgccgcgcctga
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