Azoarcus olearius DQS-4: dqs_1137
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Entry
dqs_1137 CDS
T04423
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aoa
Azoarcus olearius DQS-4
Pathway
aoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
dqs_1137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoa03021
]
dqs_1137
03019 Messenger RNA biogenesis [BR:
aoa03019
]
dqs_1137
Transcription machinery [BR:
aoa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
dqs_1137
Messenger RNA biogenesis [BR:
aoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
dqs_1137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
S1CSD-TOTE-2
Fungal_virus_P2_C
NACHT
Mor
AAA
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ANQ84194
LinkDB
All DBs
Position
complement(1188562..1189869)
Genome browser
AA seq
435 aa
AA seq
DB search
MEEGSASSAESTAAAALHLSELKALHVSQLLEMAVANEIEGANRLRKQELVFALLKNRAR
KGEPIYGDGALEVLPDGFGFLRSPDTSYLAGTDDIYVSPSQIRRFNLHTGDTIEGEIRTP
KDGERYFALVKLDKINGRPPEECKHKILFENLTPLHPQECLKLEREIRGEENVTSRIIDM
IAPIGKGQRGLLVAPPKSGKTVMLQHIAHAITANHPDVELIVLLIDERPEEVTEMQRSVK
GEVVASTFDEPASRHVQVAEMVIEKAKRLTEHKKDVVILLDSLTRLARAYNTVVPASGKV
LTGGVDANALQKPKRFFGAARNIEEGGSLTIIATALIDTGSRMDDVIYEEFKGTGNMELH
LDRRMAEKRVYPAINVNRSGTRREELLMKPDVLQKIWILRKLLYGMDDIDAMEFLLDKVK
ATKGNAEFFDAMRRG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaagagggttctgcttcgtccgccgaatccacggctgctgcggccttgcatctgtcg
gagctgaaagctctgcatgtgagccagctgctggaaatggcggttgccaacgaaatcgag
ggtgcgaaccggctccgcaagcaggaactcgtcttcgcgctgctgaagaatcgtgcgcgc
aagggcgagccgatctacggcgacggcgcgcttgaagtcctgccagacggcttcggcttc
ctgcgctcgcccgacacctcgtacctggcgggtacggacgacatctacgtgtcgccctcg
cagatccggcgtttcaatctgcacaccggcgacaccatcgagggcgagatccgcaccccg
aaggatggcgaacgctactttgcgctggtcaagctcgacaagatcaacgggcgaccgccg
gaagagtgcaagcacaagatcctgttcgagaacctcacgccgctgcatccgcaggagtgc
ctgaagctcgaacgcgagatccgcggcgaagagaatgtcaccagccgcatcatcgacatg
atcgcgccgatcggcaaaggccagcgcggcctgctcgtcgccccgccgaagagcggcaag
acggtgatgctgcagcacatcgcccacgcgatcacggccaaccatccggacgtggagttg
atcgtgctgctgatcgacgagcgcccggaagaagtgacggagatgcagcggtcggtgaag
ggcgaggttgtggcctccaccttcgacgaacccgcgtcgcgccatgtgcaagtcgccgaa
atggtgatcgagaaggccaagcgcctgaccgagcacaagaaggacgtggttatcctgctg
gactcccttacccggcttgcccgcgcctacaacaccgtggtgcccgcttccggcaaggtg
ttgaccggcggtgtcgacgccaatgcgctgcagaaacccaagcgtttcttcggtgcggcg
cgcaacatcgaggaaggtggctcgctgaccatcatcgccaccgcgctgatcgacaccggc
agccgcatggacgacgtgatctacgaggagttcaagggcaccggcaacatggagctccac
ctcgaccgacgcatggcggagaagcgcgtctatccggcaatcaacgtgaatcgctccggc
acccggcgcgaagaactgctaatgaagccggacgtgctgcagaagatctggatactgcgc
aagctgctgtatggcatggacgacatcgacgcgatggaattcctgctcgacaaggtcaag
gccaccaagggcaacgccgaattcttcgatgcaatgaggcgcggatag
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