Azoarcus olearius DQS-4: dqs_3456
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Entry
dqs_3456 CDS
T04423
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aoa
Azoarcus olearius DQS-4
Pathway
aoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
dqs_3456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoa03019
]
dqs_3456
03400 DNA repair and recombination proteins [BR:
aoa03400
]
dqs_3456
Enzymes [BR:
aoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
dqs_3456
Messenger RNA biogenesis [BR:
aoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
dqs_3456
DNA repair and recombination proteins [BR:
aoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
dqs_3456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
ANQ86477
LinkDB
All DBs
Position
3733586..3735412
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AA seq
608 aa
AA seq
DB search
MSAYTHTSPHHVLEHVFGYTAFRGEQQAIVEHVAAGGDALVLMPTGGGKSLCYQVPALLR
EGTAIVVSPLIALMHDQVSALVEAGVKAAFLNSSLDAEEARRVERALYAGELDLLYVAPE
RLMTPRFLDQLDHLRDTHRLALFAIDEAHCVSQWGHDFRPEYLQLSILPERYPAIPRIAL
TATADRQTREEIATRLRLEDARRFISSFDRPNIRYTIVDKDDPRRQLLHFIREEFPSEAG
VVYCLSRRKVEETAAWLQEQGINALPYHAGLGQDVRAEHQTRFLREDGIVMVATIAFGMG
IDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAQAWMAWGAQDVVQQRRMIDESEASE
DFKRLARNRLDVLVGLVEATTCRRQHLLAYFGEESGPCGNCDNCLSPPQTWDATEAARKA
LSCVYRTGQRYGTGHLIDVLRGERTEKVLERQHEGLSTFGIGSELDEKRWRTVFRQLIAR
EYLAVDHERYNALALTELARPLLRGEAEFHLRLERERSKGRGKSRSAARMDIPGGVPTTL
FDRLRAWRAATAKERNVPAYVIFHDATLREIAIARPTSMAELGGISGIGDRKLEAYGQAI
VDLVAEVG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctatacccacacctccccgcaccacgtcctcgaacacgtcttcggctacacc
gcgttccgcggcgagcaacaggcgatcgtcgagcatgtcgcggccggcggggacgccctg
gtgctgatgcccaccggcggcggcaagtcgctgtgctaccaggtgccggcgctgctgcgc
gagggcaccgcgatcgtggtgtcgccgctgatcgcgctgatgcacgaccaggtgagcgcg
ctggtggaagcgggcgtgaaagcggccttcctcaactccagcctggacgcggaagaagcg
cgcagggtggagcgcgcgctctatgccggcgaactcgacctgctctacgtggcgcccgaa
cggctgatgacgccgcgcttcctcgaccagctcgaccacctgcgcgacacccaccgcctg
gcgctgttcgcgatcgacgaggcgcactgcgtgtcgcagtggggccacgatttccggccg
gaatacctgcagctgtcgatcctgccggagcgctacccggcgatcccgcgcattgcgctg
accgccaccgccgaccgccagacccgcgaggagatcgccacccggctgcggctggaagat
gcgcgccgtttcatctccagcttcgaccgccccaacatccgctacaccatcgtcgacaag
gacgatccgcgccgccagctgctgcacttcatccgcgaggagtttccgtccgaggccggc
gtggtgtattgcctgtcgcggcgcaaggtggaggaaaccgccgcctggctgcaggaacag
ggcatcaacgcgctgccctaccacgccgggctcggccaggacgtgcgcgccgaacaccag
acccgcttcctgcgcgaggacggcatcgtgatggtggcgaccatcgccttcggcatgggc
atcgacaagcccgacgtgcgcttcgtcgcccacctcgacctgccgcgctcgatcgagggc
tactaccaggaaaccggccgcgccggccgcgacggcctgccggcgcaggcgtggatggcg
tggggcgcgcaggacgtggtgcagcagcgccgcatgatcgacgagtccgaagcgagcgag
gacttcaagcgcctcgcgcgcaaccggctggacgtgctcgtcggcctggtcgaagccacc
acctgccgccgccagcatctgctcgcctacttcggcgaggagtccggcccttgcggcaac
tgcgacaactgcctcagcccgccgcagacctgggacgccaccgaggccgcgcgcaaggcc
ttgagctgcgtctatcgcaccggccagcgctacggcaccggccatctgatcgacgtgctg
cgcggcgaacgcaccgagaaagtgctggaacgccagcacgaggggctcagcaccttcggc
atcggcagcgaactcgacgaaaagcgctggcgcaccgtgttccgccagctgatcgcacgc
gaatacctcgcagtggatcacgagcgctacaacgcgctcgcgctcaccgaactcgcccgc
ccgctgctgcgcggcgaggccgaattccacctgcgcctggagcgcgaacgcagcaagggc
cgcggcaagtcgcgctcggccgcccgcatggacatccccggcggcgtgccgaccacgctg
ttcgaccgcctgcgcgcgtggcgcgccgccaccgccaaggaacgcaacgtgccggcctac
gtcatcttccacgacgccacgctgcgcgaaatcgccatcgcccgcccgaccagcatggcc
gaactcggcggcatcagcggcatcggcgaccgcaagctggaggcttacggccaggccatc
gtcgatctggtggccgaggtcggctga
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