Azoarcus olearius DQS-4: dqs_3562
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Entry
dqs_3562 CDS
T04423
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aoa
Azoarcus olearius DQS-4
Pathway
aoa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aoa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
dqs_3562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoa03021
]
dqs_3562
03400 DNA repair and recombination proteins [BR:
aoa03400
]
dqs_3562
Enzymes [BR:
aoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
dqs_3562
Transcription machinery [BR:
aoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
dqs_3562
DNA repair and recombination proteins [BR:
aoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
dqs_3562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
ANQ86583
UniProt:
A1KB33
LinkDB
All DBs
Position
complement(3834069..3838283)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKSLLADLFKQTLPNEEEFDAITIGLASPDKIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLNRAQLLTEDDYLAKVEEYGDDFDA
VMGAEGIRELLRTLDVNQEIERLRSDLETTGSEAKIKKFSKRLKVLEAFQQSGIKPEWMI
LEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRM
LQESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PQLKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKQAKKMVESQEPVVWDILEDVIRE
HPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCVAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGDPIIVPSQDIVLGLYYATREGVNVPGEGMLFTDVGEVKRAYE
SGQISLHARVTVRLKEFDRGPEGERIERVVRHNTTAGRAILSEILPAGLPFSVIDKPLKK
KEISKLINASFRRCGLRATVIFADQLMQYGYRLATRAGISIAVKDMLVPDLKEDLIRAAE
AEVKEIAQQYTSGLVTDGERYNKVVDIWGRCGDQVAKAMMEQLGQEPVVDRNGNTVKQEA
FNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITTNFREGLNVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTREGFNMKALIEGGEVVEPLRER
ILGRVCAEDVVNPDTQETAIEAGTLLDEDMVDLIESLGVDEVKVRTPLTCETRYGLCAKC
YGRDLGRGAMVNAGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASRAAAASGVEAKSSGTI
RFAGNMRYVANAKGEKVVIARSAEVVVADDMGRERERHKLPYGAMLLVDDGAQVKAGAQL
ASWDPHTRPIVTEYSGTVKFENVEEGVTVAKQIDEVTGLSTLVVIDSKRRSSSGAAKGVR
PQVKLLDENGEEVRIAGTDHAVAITFQVGSLITVKDGQQVSVGDILARIPQESAKTRDIT
GGLPRVAELFEARSPKDAGLLAEYTGTVSFGKDTKGKQRLVITEPDGTVHEFLIPKDKHL
MVHDGQVVNKGELIVDGPADPHDILRLQGINELARYIIDEVQDVYRLQGVKINDKHIEVI
VRQMLRRVVITDPGDTKFIREEQVERSEVLDENDRIEAEGKLPAQYENVLLGITKASLST
DSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHRSRRSQSAGE
DLGIEHAWAPIETPAEEQHDISAS
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcctgctcgctgacctgttcaagcaaaccctgccgaacgaggaagagttcgac
gcgatcaccatcggtctcgcgtcgccggataagatccgctcgtggtcctacggtgaggtg
aagaagcccgagaccatcaactaccgtaccttcaagccggaacgcgacggcctgttctgc
gccaagattttcggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcctc
aagcaccgtggtgtgatctgcgagaagtgcggcgtcgaggtgaccctctccaaggtgcgc
cgcgagcgcatgggtcacatcgaactggccagcccggttgcccacatctggttcctgaag
agcctgccgagccgcctcggcatggtgctcgacatgaccctgcgcgacatcgagcgcgtg
ctgtacttcgaagccttcgtcgtggttgagccgggcatgaccccgctcaaccgcgcccag
ctgctcaccgaagacgactacctcgccaaggtcgaggaatacggcgacgacttcgacgcc
gtgatgggtgccgagggcatccgcgagctgctgcgcacgctcgacgtgaaccaggagatc
gaacgcctgcgttccgacctggagacgaccggttccgaagccaagatcaagaagttctcc
aagcgcctgaaggtgcttgaggccttccagcaatccggcatcaagccggaatggatgatc
ctggaagtgctgccggtgctgccgccggatctgcgcccgctggtgccgctggatggtggc
cgcttcgcgacgtccgacctgaacgacctctaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcgcctgctcgaactgaaggcgccggacatcatcgtccgcaacgaaaagcgcatg
ctgcaggagtcggtggactccctgctcgacaacggccgccgcggcaaggcgatgaccggt
gccaacaagcgtccgctgaagtcgctggccgacatgatcaagggcaagggcggccgcttc
cgccagaacctgctcggcaagcgggtggactactccggtcgttccgtgattaccgtgggc
ccgcagctcaagctgcaccagtgcggtctgcccaagctgatggcgctcgagctgttcaag
cccttcatcttcaacaagctcgaactgatggggctggcgacgaccatcaagcaggccaag
aagatggtggagtcgcaggagccggtggtgtgggacatcctcgaagatgtcatccgcgaa
cacccggtgatgctgaaccgcgcgcccacgctgcaccgtctcggcatccaggcttttgag
ccggtgctgatcgaaggcaaggcgatccagctgcatccgctggtctgcgtggcgttcaac
gccgacttcgacggtgaccagatggccgtccacgtgccgctgtcgctggaagcgcaaatg
gaagcgcgcacgctgatgctggcctccaacaacgtgctgtcgcccgccaacggcgacccg
atcatcgttccgtcgcaggacatcgtgctcggcctgtactacgcgacccgcgaaggcgtg
aacgtgccgggcgaaggcatgctgtttaccgacgtgggtgaagtgaagcgcgcctacgag
tcgggtcagatctcgctgcacgcccgcgtgacggtgcgtctgaaggagttcgaccgcggt
ccggagggggagcgcatcgagcgcgtggtgcgtcacaacaccaccgccggccgtgccatc
ctgtcggagatcctgccggcaggcctgcctttcagcgtgatcgacaagccgctgaagaag
aaggaaatctcgaagctgatcaacgcgtcgttccgccgctgcggcctgcgcgcgacggtg
atcttcgccgatcagctgatgcaatacggctaccgtctcgcgacccgcgccggtatctcg
atcgcggtcaaggacatgctggtgccggatctgaaggaagacctgatccgcgccgccgaa
gccgaagtcaaggaaatcgcacagcagtacacgtcgggtctggtgaccgacggcgagcgc
tacaacaaggtcgtggatatctgggggcgctgcggcgaccaggtggccaaggcgatgatg
gagcagctcggccaggagccggtggtcgaccgcaacggcaataccgttaagcaggaagcg
ttcaactccatctacatgatggccgactccggggcccgtggttcggcggcgcagatccgt
cagctggccggcatgcgcggcctgatggcgaaaccggacggctcgatcatcgagacgccg
atcacgaccaacttccgcgaaggcctgaacgttctgcagtacttcatctcgacccacggc
gcccgtaagggtctggcggataccgcgctgaagaccgcgaactccggctacctcacccgc
cgtctggtcgacgtgacgcaggatctggtcgtcatcgaagacgattgcggcacgcgcgaa
ggcttcaacatgaaggccctgatcgagggcggtgaagtggtcgaaccgctgcgcgaacgc
atcctcggccgcgtctgcgccgaggacgtggtcaatccggatacccaggaaaccgccatc
gaggccggcaccctgctcgacgaggacatggtcgacctgatcgaaagcctcggcgtcgat
gaggtcaaggtccgcaccccgctgacctgcgaaacgcgctacggcctgtgcgccaagtgc
tatggccgcgacctcggccgcggcgcgatggtcaatgccggcgaggccgtcggcgtcatc
gcggcgcagtcgatcggcgagccgggcacgcagctgaccatgcgtaccttccacgtcggt
ggcgcggcctcccgggcggctgcggcgagcggtgtcgaagccaagtcgagcggtacgatc
cgcttcgccggcaacatgcgctacgtggccaacgccaagggcgagaaggtcgtcattgca
cgttccgccgaagtggtggtggccgacgacatgggccgcgagcgtgagcgtcacaagctg
ccgtacggcgcgatgctgctggtcgatgacggcgcccaggtcaaggcaggcgcccaactg
gcgtcgtgggatccgcacacccgcccgatcgtcaccgagtactccggtacggtgaagttc
gagaacgtcgaagaaggcgtgacggttgcgaagcagatcgacgaggtcaccggcctgtcg
acgctcgtggtcatcgattcgaagcgtcgctccagctccggcgccgccaagggcgtgcgt
ccgcaggtgaagctgctggacgagaacggcgaagaggtgcggatcgccggcaccgaccac
gcggtcgcgatcaccttccaggtcggctcgctgatcaccgtgaaggacggccagcaggtc
agcgtcggcgacatcctggcccgtatcccgcaggaatcggcgaagacgcgcgacattacc
ggcggtctgccgcgtgtggcggaactgttcgaagcgcgttcgccgaaggacgccggcctg
ctggccgagtacaccggtacggtttcgttcggcaaggacaccaagggcaagcagcgtctc
gtgatcaccgagccggacggcacggtgcatgagttcctgatcccgaaggacaagcacctg
atggtccacgacggccaggtggtgaacaagggtgagctgatcgtcgacggtccggcggat
ccgcacgacatcctgcgtctgcagggcatcaacgaacttgcgcgctacatcatcgacgag
gtgcaggacgtctatcgtctgcaaggcgtgaagatcaacgacaagcacatcgaggtgatc
gtccgccagatgctgcgtcgcgtcgtcatcaccgatccgggcgataccaagttcatccgc
gaggagcaggtcgagcgctcggaagtgctggacgagaacgatcgcatcgaggcggaaggc
aagctgccggcgcagtacgaaaacgtgctgctgggtattaccaaggcgtcgctgtccacc
gactcgttcatctcggcggcctcgttccaggaaaccacccgcgtgctgaccgaagcggcg
atcatgggcaagcgcgacgaactgcgtggcctgaaggagaacgtcatcgtcggtcgcctg
atccccgccggtaccggcctggcctaccaccgcagccgtcgctcgcagtcggccggagag
gacctcggcatcgagcacgcgtgggcgccgatcgaaacgcccgccgaggagcagcacgac
atttccgcgagttga
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integrated database retrieval system
