Azoarcus olearius DQS-4: dqs_4002
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Entry
dqs_4002 CDS
T04423
Name
(GenBank) DNA helicase
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
aoa
Azoarcus olearius DQS-4
Pathway
aoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
dqs_4002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoa03400
]
dqs_4002
Enzymes [BR:
aoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
dqs_4002
DNA repair and recombination proteins [BR:
aoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
dqs_4002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ANQ87018
LinkDB
All DBs
Position
complement(4303593..4307012)
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AA seq
1139 aa
AA seq
DB search
MFSIVFSNRYECLQAMLLERLAAERPGPFGKRHVVVPSSALRRDVELAVAEHEGVCANVE
FSYLAQWLWTQIGHVVEVPARSPFAPALLAWRVHALLDPAAPAGDWVAAHPRLAHYLAGA
DARMRFELAERIARVFDHYLTYRPHWLESWARGERARLGEATEAERADEAWQAALWRHIR
DGLALRQEHPAALFLRRVAGMDERALAAAGLPQTVHVFGLPALPPLYLAILRELARVVDV
RLYALNPCREFWFEIVDPRRLSWLAARQADMFHETGNRLLAAWGQQTQAHIGLLFEGERE
VVEEALFEPHPGRHLLARLHNAILDMEELEPGSVALAANDRSIELHVCHSRTRELEVLHD
RLLDLMKAAAKRGEPLRPDEIVVLTPDLDATAPLIEAVFGTAPAARRIPWRITGLGGTQE
NPVAAALDRLLALVAGRLPASAVFDLLQQPVVAARFGLGEGDLETIHDWMRAAGIRWGLD
AEHAAAAGGVPVQACGGHTLDAGLDRLFLGWAAGDAATAAPFAGFIGAGAAEGNAALALG
RLWRYVDTLRALRADLQRPQQAAGWRRALDSALTRLVGDEPEWAEALREVREAIVALTQA
MAAAATDDGDAPAIPLAVVHPALIAQLDDPARGGVPGGTVTFSALSSLRGLPYRVVCVVG
LDQGLFPGSDRPAEFDLMAARPERGDRQRRHDDRNLFLDVLLSAREVLHLSHVGRSVRDG
SALPPSVLVDELFDVLAAACAADPGKPDDLAAARRRLTVEHPLQAFSAEYFLPQGERDPR
LVSYHEEYAAALAARLGAPLRDADDDALVALAEEGDEVAVDGARVPFFDAPLPPPGPEWR
EVGLPQLIRFFRNPSRYLLRDRLGLALPEGEAELEDVEPMVPDFLGRQALAERLLPALLG
ATVPDEEALLALARAGGEYPAGALGEGALRRELAQLAVFAAGVRAELPARPLPPHVPTLA
FDLDGEPWTLGAAFGDLRPQGLLRQRYDDCRPVDYLAAWLAHLVLCAAPAPDVACETTLL
ARDGRCRFVAVPPATAHALLADCLRLYRDGLLRPLHFFPKAAWAYAVNGESMGKAYARWQ
GGNRPAFAESADPAYRLALRGVADPLADDFAALASRVLGPLLDHLDDPRLDLAPAQESA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgttctccatcgtcttctccaaccgctacgaatgcctgcaggcgatgctgctcgagcgt
ctcgccgccgagcgtcccggccccttcggcaagcgccatgtggtggtgccgagcagcgcg
ctgcggcgcgatgtcgagctggcggtggcggagcacgagggcgtctgcgccaatgtcgag
ttctcctacctcgcgcagtggctgtggacccagatcgggcacgtggtggaggtgccggcg
cgctcgccgtttgcgcccgcgctgctggcgtggcgggtccatgcgctgctcgacccggcc
gcgccggcgggcgactgggtggccgcgcatccacgcctggcgcactacctggcgggcgcg
gatgcgcgcatgcgcttcgaactcgccgagcgtatcgcgcgcgtgttcgaccactacctc
acctaccggccgcactggctggaaagctgggcgcgcggcgagcgggcgcggctgggcgag
gcgaccgaggcggagcgcgccgacgaggcgtggcaggcggcgctgtggcgccacatccgt
gacggcttggcgctgcgccaggaacacccggccgcgttgttcctgcgccgggtcgccggc
atggacgagcgcgcgcttgccgccgccggcctgccgcagacggtgcacgtgttcgggctg
ccggcgctgccgccgctctatctggcgatcctgcgcgagctggcgcgggtggtggacgtg
cgcctgtatgcgctcaatccctgccgcgagttctggttcgagatcgtggatccgcgccgg
ctgtcgtggctggcggcgcgccaggccgacatgttccatgaaaccggcaaccgcctgctt
gccgcttgggggcagcagacccaggcgcatatcgggctgctgttcgagggcgagcgcgag
gtggtggaagaggcgctgttcgagccccatcccgggcgccatctgctcgcgcggctgcac
aacgcgatcctcgacatggaggagctggagccgggcagcgttgcgctggcggcgaacgac
cgcagcatcgagctgcacgtgtgccattcgcgcacgcgcgagctggaggtgctgcacgac
cgcctgctcgacctgatgaaggccgcagcgaagcggggcgaaccgctgcggcccgacgag
atcgtggtgctgacgcccgacctcgatgccaccgcgccgctgatcgaggccgtgttcggc
accgcccccgccgcgcgccgcatcccgtggcgcatcaccggcctcggcggcacccaggag
aacccggtggccgccgcgctcgaccgcctgctcgcgctggtggccgggcgcctgcccgcg
agcgcggtgttcgatctgctgcagcagccggtggtggcagcgcgcttcgggctgggcgag
ggcgatctcgaaaccatccacgactggatgcgcgcagccggcatccgctgggggctggat
gccgagcacgccgccgccgcgggcggggtgccggtgcaggcctgcggcgggcatacgctg
gatgccggcctggaccgcctgttcctcggctgggcggcgggggatgcggccaccgcggcg
ccgttcgccggcttcatcggcgccggcgcggcggagggcaacgccgcgctggcgctcggc
cgcctgtggcgctacgtggacaccctgcgcgcgctgcgcgccgacctgcaacggccgcag
caggccgccggctggcggcgcgcgctggacagcgcgctgacgcgcctggtgggcgacgag
ccggaatgggcggaagcgctgcgcgaggtgcgcgaggcgatcgtcgcgctgacgcaggca
atggcggccgctgccaccgacgacggcgacgcgccggcgattccgctcgcggtggtgcat
ccggcgctcatcgcgcagctcgacgatcccgcgcgcggcggcgtgccgggcggcaccgtc
acattctccgcgctgtcctcgctgcgcgggctgccctaccgcgtggtgtgcgtcgtaggg
ctggaccaggggcttttcccgggcagcgaccgcccggccgaattcgacctgatggcggcg
cgccccgagcgcggcgaccggcagcgccgccatgacgaccgcaacctcttcctcgacgtg
ctgctgtcggcgcgcgaagtgctgcacctgtcgcacgtcggccgcagcgtgcgcgacggc
tccgcgctgccgccgtcggtgctggtcgatgagttgttcgacgtgctcgccgccgcctgc
gcggcggacccgggcaagccggacgacctcgccgcggcgcgccggcggctgacggtggag
catccgctgcaggcgttctcggccgagtatttcctcccgcagggcgaacgcgacccgcgc
ctcgtgagctatcacgaggaatatgcggcggcactcgcggcgcggctcggcgccccgctg
cgcgacgcggacgacgacgcgctggtcgcgctcgccgaggagggcgacgaggtggccgtc
gatggtgcccgcgtgcctttcttcgatgccccgctgccgccgcccggcccggaatggcgc
gaggtcggtcttccgcagctgatccgcttcttccgcaaccccagccgctacctgctgcgc
gaccgcttggggctggcgctgcccgagggcgaggcggagctggaggacgtcgagccgatg
gtgcccgacttccttggccgccaggcgctggccgagcgcctgctgccggcgctgttgggc
gccacggtgccggacgaggaggcgctgctcgcgcttgcccgcgccgggggcgaatacccg
gcgggcgcgctcggcgagggcgcgctgcggcgcgaactggcgcagctcgcggtgtttgcg
gccggggtgcgtgccgagctgcccgcccggccgctgccgccgcatgtgcccacgctcgcg
ttcgacctcgacggcgaaccgtggacgctcggcgccgcgttcggcgacctgcgcccgcag
ggcctgctgcgccagcgttacgacgactgccgcccggtggattacctcgccgcctggctc
gcccacctggtgctgtgcgccgcgccggcgccggacgttgcgtgcgagaccacgctgctc
gcgcgcgacggccgctgccgcttcgtcgcggtgccgcccgcgactgcgcacgcgctgctg
gccgactgcctgcgcctgtaccgcgacggcctgctgcggccgctgcacttctttccgaaa
gcggcgtgggcctacgccgtcaatggcgaaagcatgggcaaggcctacgcgcgctggcag
ggcggcaaccgcccggccttcgccgaaagcgccgaccccgcctatcgcctcgcgctgcgc
ggcgtggccgatccgctcgccgacgacttcgccgccctcgccagccgggtgcttgggccc
ttgctggaccacctggacgacccccgcctcgacctcgcgccggcgcaggagagcgcatga
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