Azoarcus olearius DQS-4: dqs_4121
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Entry
dqs_4121 CDS
T04423
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aoa
Azoarcus olearius DQS-4
Pathway
aoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
dqs_4121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoa03400
]
dqs_4121
Enzymes [BR:
aoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
dqs_4121
DNA repair and recombination proteins [BR:
aoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
dqs_4121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
nSTAND_NTPase5
HypA
SLFN-g3_helicase
zf-CHY
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ANQ87137
LinkDB
All DBs
Position
complement(4433949..4436120)
Genome browser
AA seq
723 aa
AA seq
DB search
MRIVRVALPVPLTQLFDYSLEDACETDVGRCVRVPFGRGDKSGVIVELAELAAVEPARLK
PVLHVQREVEPLPPDWLALVAFVARYYHAPLGEVIGLALPPGLRRADEVSGELTDPLLEP
SAAGALALAETKRESRALALLREVAGLGAPVRRSAVRALAAGSAVGDALRRGWLQPAAGQ
PAHVAAAAPALTDEQAQALATMEAAGAGFRAWLLQGVTGSGKTEVYLRLAERALAAGGQV
LMLVPEIALTPQLERRVAERFPSAQVVSLHSALAEGARSRGFVQALEGQADIVLGTRLAV
FAPLPRLGLILVDEEHDASYKQQEGVRYSARDVAVWRARQRGVPVVLGSATPSLETWQHA
RQGRYGLLSLRRRAVAAALPPVRYVDTRRQRLDEGLSAALCQAIEQRLERGEQSLVFLNR
RGYAPVLACPSCGWISRCPHCSANLVVHLMDRRVRCHHCGAEGPIPPACPSCGDQDIQPY
GRGTQRIEARLAERFPQARVLRVDRDAARTRAQWEGLLQTIADGGADILVGTQMMAKGHD
FPRLTLVGVVGADASLHAADFRAPERLFQQLMQVGGRAGRGALAGEVLVQTEYPGHALYQ
HLARHDFDAFAAMALEERRQAGFPPHTAQAMLRADAPALEAATDFLQHARRLGEERAAPG
IRLYDPVPMRLTRLARRERAQLLVEADQRALLQGFLVEWMAALRAQRTPRELRWQIDVDP
LEV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgtccgcgtcgcgttgccggtgccgctaacgcaactttttgattattcgctg
gaagatgcatgcgagacggatgttgggcgatgcgtccgggtgccgttcgggcgtggggac
aagagcggcgtcatcgtcgaactggctgaactggcggcggtggagccggcgcggctcaag
ccggtgcttcacgtccagcgcgaggtggagccgctgccgccggactggctggcgctcgtc
gccttcgtcgcacgctactaccacgccccgctgggcgaggtcatcggactcgccttgccg
ccgggattgcggcgcgccgacgaggtcagcggcgagttgaccgatccgctgctggaaccg
agcgctgccggggcgctggcccttgccgagaccaagcgtgaaagccgcgccctggcgctg
ctgcgcgaggtcgccggattgggggcgccggtgcgccgcagcgccgtgcgggcgcttgcg
gccggcagcgcggtgggggatgcgctgcgccggggctggttgcagcccgccgccgggcaa
cccgctcatgtcgcggccgccgcgcccgcattgaccgacgaacaggcgcaggcccttgcc
acgatggaggcggcgggcgccggttttcgcgcctggttgctgcagggggtgaccggcagc
ggcaagaccgaggtctacctgcgtctcgcggaacgggcactcgccgcgggcgggcaggtc
ttgatgctggtgccggagatcgcgctcaccccgcagctcgaacgccgcgtcgccgagcgc
tttccgtccgcgcaggtcgtcagcctgcattcggcgctggcggagggggcgcgctcgcgt
ggcttcgtccaggcgctcgaaggccaggcggacatcgtgctgggtacgcgcctggcagtc
tttgccccgttgccgcgcctggggctgatcctggtcgatgaggaacacgacgcgtcctac
aagcagcaggagggggtgcgctattcggcacgcgacgtcgcggtatggcgtgcgcgccag
cgcggggtgccggtggtcctcggttccgctacgccctcgctggaaacctggcagcacgcc
cggcagggccgctacggcttgttgtcgctgcggcggcgcgcggtggcggccgcgctgccg
ccggtgcgctatgtcgatacccgcaggcagcggctcgacgaggggctgagcgcggcgctg
tgccaggccatcgagcagcgtctggaaaggggcgaacagagcctggtgtttctcaaccgg
cgcggctacgccccggtgcttgcctgcccgtcatgcggctggatcagccgctgtccgcat
tgctcggcgaacctcgtggtgcatttgatggaccggcgcgtgcgttgccaccattgcggg
gccgaaggtcccattccgcccgcctgtccgagttgcggcgatcaggacatccagccctac
gggcgcggcacgcagcggatcgaggcgcgcctggccgaacgtttcccgcaggcgcgggtg
ctgcgggtcgatcgcgatgccgcacgcacgcgggcgcagtgggaagggctgctgcagacg
atcgcggacggcggggcggacatcctcgtcggtacccagatgatggccaaggggcacgat
tttccgcgcctgacgctggtcggggtggtgggggccgacgcctcgctgcacgccgccgac
ttccgcgcgccggagcgtctgttccagcaactgatgcaggtcggtggccgcgccgggcgc
ggtgcgcttgcgggcgaggtgctggtccagaccgagtaccccggccacgcgctgtaccag
cacctggcccgccacgacttcgacgcctttgcggcgatggcgctggaggagcggcgccag
gcgggttttccgccgcatacggcgcaggcgatgctgcgcgccgacgcccccgcgctggag
gccgccaccgacttcctgcagcacgcccgccggcttggagaagagcgcgccgcgccgggc
atccgcctctacgatccggtgccgatgcgcctgacgcggctcgcccgccgtgagcgcgcg
caactgctggtggaggcggaccagcgagcgttgttgcagggctttctggtggagtggatg
gctgccttgcgggcgcagcgaacgccacgcgaactgcgctggcagatcgacgtcgatccg
ctggaggtctga
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