Acholeplasma oculi: Aocu_01930
Help
Entry
Aocu_01930 CDS
T03695
Name
(GenBank) ATP-dependent DNA helicase, RecQ-family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aoc
Acholeplasma oculi
Pathway
aoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aocu_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoc03019
]
Aocu_01930
03400 DNA repair and recombination proteins [BR:
aoc03400
]
Aocu_01930
Enzymes [BR:
aoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aocu_01930
Messenger RNA biogenesis [BR:
aoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Aocu_01930
DNA repair and recombination proteins [BR:
aoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Aocu_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrD-helicase
Helicase_C
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_30
AAA_22
ResIII
Retrotrans_gag
AAA_16
AAA_11
SRA_like
Motif
Other DBs
NCBI-ProteinID:
CDR30266
UniProt:
A0A061AFG4
LinkDB
All DBs
Position
1:196996..201801
Genome browser
AA seq
1601 aa
AA seq
DB search
MTFYIDTEVSQNFKIKDIGCLNDKGEYIHTANPDELYQFIKKADFFVGHNIVQHDLVYLR
RLKYGKIFHEDMSIDTLFLSTLLFPEKPYHKLVKDDKLETDTLNNPLNDAMNSKKLFLEI
IEAFNNLDEDMKDIFFNLLSDKEGFKGFFKYIKFKRKIRNLYDLIMYKFEGLICKNSNLH
QYIKKHPIELSYALTLIKTNNVESLLPAWVLKNYAYVEVILTELRGTLCYQGCSYCEQKI
NPVIALNKIYGYEKFRTFDGDNLQENAVRSALKGESLIAVFPTGGGKSLTFQLPALISRE
ATRGLTVVISPLQSLMKDQVDNLEEKSVTAAVTINGLLDPIQRANAIKRVSDGSAGILYI
APESLRSKTIESLLINRHVVRIVIDEAHCFSTWGHDFRVDYLYIGDFIKKIQEIKKQEYP
IPVSCFTATAKQNVIEDIAEYFRKKLNLEMKIFKTDSSRKNLKYKVMDVKEEALRYPLMR
SIVEQEDRPTIIYASRRKTVETLYHKMTSDNFNVSYFHGGMEIDQKVKEQDKFMTGQTKI
MIATSAFGMGVDKSDVGCVIHYEISDSLENYVQESGRAGRNENINANCYVLYNEDDLNKH
FDMLNSSKLNIKEIQSIWKAIKDLTKLRDNVSQSALEIAKMAGWDDSIMDLQTRVTTAIA
ALEDAGYLKRGQNSPRLYANSIIVNSVIEANQLIEQSGLFINQDLIHAKRIMQMLISSKY
RSKAGNAESESRVDYISDILGIDKKDVIKTIGLLREAKILSDDKDLNSHIKSNTKPTQAV
KTLEDNVKLMRFILNHVSHDAKIYNIKNLNELAHDAELNCTTKSLRAALNYLEISKLIMV
SKEGKDSLKILLEGDRETIIEHIDRLYQISSVIVSYLFNKSFTPKTDQSENLVSFSILEL
KYHYEKIQGFLDQSIEQKDIEQAIFFLQKIHALHIEGGFMVIYSPINVERVIKDNYKQFT
KTDYKKLEDFYKGKMHQIHIVGEYASKMLKDYESALTFVNDYFKFDFEYFLNKYFSGSRR
KELDRNLSPKKFKELFGTLTTEQLSVITEKHHKRIAVAAGPGSGKTKLLVHKLASIIHME
DVRQEQLLMLTFSRAAVVEFKSRLLDLIGPPAYYIDITTFHSFAFDLLGKVGDLEKTDTI
IKDATQLIINNEVDAYKVTRAVLVIDEAQDMNEDEFNLIQALINYNENLTVIAVGDDDQN
IFEFRGSSSEYFRQIAKEENAFYELTVNFRSKNNLVEFANQFAMKIPNRLKSTPIRSFTD
KDGTIKITRQLNRNYVSSIVNEVIHSSYQGTTCILTKTNEQALEITGLLKKHKVQASLIQ
NNEDFKLFHLYELNHFYQTLVKMDSVNITDVNWESAMNKFKNQFTHSKNYDLLIRILESF
KKTSSKIIYISDFKEFLYEASLSDYYLESKVMVSTYHKAKGKEFDHVILLYDNEYRNIQD
GELKALYVGITRAKTSLSIHTNHAVFDQISTNNIHRVIDESPHIRSDRLVVQSGHKGINL
GYSKFVQKNIANALPGNKLELIDENILTFNGRKVLKFSNATQNQISDLLEKGYKLTDGSI
DHMVYWFDRTDESYNLIVLPELIFDDVGTLENDVYKKVENS
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgacattttatatagacacagaagtcagtcaaaactttaagattaaagatataggctgt
cttaatgataaaggtgagtatatacatacagctaatccagatgaactttaccagttcatc
aaaaaagctgatttttttgttggacataatatagttcaacatgacttagtgtatttaaga
agattaaaatatggaaaaatatttcatgaagatatgtctatagatacactatttctatct
acattactgtttcctgaaaaaccgtatcataaattagttaaagatgataaattagaaaca
gacacactaaataacccactcaatgatgcaatgaattcaaaaaaattatttttagaaatc
attgaggcatttaacaatcttgatgaggatatgaaagatatattctttaatctactatca
gataaagaaggatttaaaggctttttcaaatacatcaaatttaagagaaaaattagaaat
ctttatgatttaatcatgtataaatttgaaggtttaatttgtaaaaactcaaaccttcat
caatatattaaaaaacatccaattgaactttcctacgcattaacacttataaaaactaat
aatgttgaatctttgttacctgcttgggtattaaaaaactatgcatatgtcgaagttata
ttaacagaacttagaggaactctttgttatcaaggttgctcatactgtgaacaaaagatt
aatccagtcattgcacttaataaaatttatgggtatgaaaaatttagaacctttgatgga
gataatttgcaagaaaatgcggtaagatctgcattaaaaggtgaatcattaattgctgta
ttcccaacgggtggaggaaaatcattaacctttcaattaccagcattaataagtcgtgaa
gcaactagagggttaactgttgttatatcacctttgcaatcacttatgaaagaccaagta
gataatctagaagaaaagagtgtcacagctgctgtgacaattaatggattacttgatcca
atacagcgagcaaacgcgattaaaagagtaagtgatggatcggctggtattttatatatt
gctccagaatcacttcgttcaaaaactattgaaagcttattaatcaaccgacatgttgtt
agaatagttattgatgaagcacactgtttttcaacttggggtcatgactttagagtggac
tatttatatataggtgattttataaagaaaatccaagaaataaagaaacaggaatatccg
attccggtttcttgttttactgcaacagctaaacaaaatgtcatcgaagacattgctgaa
tattttagaaaaaaactgaatttagaaatgaaaatttttaaaacagatagttcaagaaaa
aaccttaagtataaagttatggatgttaaagaagaagcacttagatatccattgatgcgt
agtattgtagaacaagaagaccgaccaacaatcatttacgcatctagaagaaaaacagtt
gaaactttatatcataagatgacttctgataattttaatgtttcttatttccatggtggt
atggaaatcgatcaaaaggttaaagaacaagataaatttatgacaggtcaaacaaaaatt
atgattgctacatctgcatttggtatgggcgtagataagtctgatgttggttgtgtaatc
cactatgaaatatcggattcacttgaaaattatgtacaagaatctggtagagcaggtcgt
aatgaaaatataaatgccaattgttatgttttatacaatgaagatgatttgaataaacat
tttgatatgctgaactcaagtaaattaaacattaaagaaattcagtctatttggaaggct
attaaggatttaactaagttaagagataatgtttctcagtccgcattagagattgctaaa
atggctggatgggatgatagcattatggatttacaaacaagagtaactacagcaattgct
gctttagaagatgcaggatatctaaagagaggacaaaactctccaagattatatgcaaac
agtattatcgtaaatagtgttatagaagcaaatcaattgattgaacaatccggtctattc
attaatcaggatttaattcatgctaaacgtattatgcaaatgctaatttctagtaaatat
agaagtaaggctggtaatgcagaatcggaaagtagagtagattatatttctgatatttta
ggaatagataaaaaggatgtaataaaaaccataggtttattaagagaagctaaaatactt
tctgatgataaagatttaaattcacatatcaaatcaaatacaaaacctactcaagcagta
aaaacattagaagataatgttaaactcatgcgctttattttaaatcatgtgagtcatgat
gcaaagatttataatataaaaaatttaaatgaactcgcacatgatgctgaactcaattgt
acaactaaaagccttagagccgcactcaattatttagaaatctcaaaactgattatggta
tcaaaagaaggaaaagatagtttaaagattttacttgaaggcgatagagaaacgattata
gaacacatagatagactttaccaaatatcttcagtcattgtttcttatttatttaacaaa
tcatttacgccgaaaactgatcaaagtgaaaatcttgtttcgttttctattttggaactt
aaatatcactatgaaaaaatacaaggatttttagatcaatcgattgaacaaaaagatatt
gaacaagccatattcttccttcaaaagatacatgcactacatattgaaggtggatttatg
gttatttactctccgattaatgtagaaagagtaattaaagataattataagcagtttaca
aaaacagattacaagaaacttgaagatttttataagggtaagatgcatcaaattcatatt
gtaggtgaatacgcatccaaaatgcttaaggattatgaaagcgcattgacatttgttaat
gactatttcaaatttgattttgaatattttttaaataagtatttttctggttcaagaaga
aaagaactagatcgtaatctatcacctaaaaagtttaaagaactatttggcactctcacg
actgaacagttaagtgttattacagagaaacaccataagcgaatcgctgtcgctgcagga
cctggaagtggcaagacaaaattactagttcacaaactagcatcgattatccatatggaa
gatgtcagacaagaacaattattaatgctaacattttctagagctgcagtggttgagttt
aagtctagattattagatttaataggaccacctgcatattatatagatataactaccttc
cattcgtttgcttttgatttgttaggcaaagttggagacttagagaaaacagatactatc
ataaaagatgcaacccagttaattattaataatgaagttgatgcttataaagttacaaga
gcagttttagtcatagatgaagcacaagatatgaatgaagatgagtttaatctcattcaa
gcattgattaactacaatgaaaatctaacagtcatcgcagtaggagatgatgatcaaaat
atttttgaatttagaggttcttcatcagaatattttagacaaatagccaaagaagaaaat
gcattttatgaactgactgtgaattttagaagtaagaataatttagttgaatttgcaaat
caatttgctatgaaaatcccaaatcgattaaaatcaactccaataagatcctttaccgat
aaagatggaacgattaagattactagacaattgaatcgtaattatgtatcttcaatagtt
aatgaggttattcattcttcttatcaaggcacaacgtgtatattaacaaaaactaatgaa
caagcacttgaaattacaggattattaaaaaagcataaggtacaagcatcacttattcaa
aataatgaagattttaaattgttccatttatatgaacttaatcatttttaccagacatta
gttaagatggattctgtaaatattacagatgtaaactgggaatcagcgatgaataaattt
aagaatcaatttactcatagtaaaaattatgacttattgataagaattctagaatcattt
aaaaagacaagttcgaaaattatctatatttctgactttaaagaatttttatatgaagcc
tcattaagtgactattatttagagtcaaaagttatggtatcaacatatcataaagctaaa
ggtaaagagtttgatcatgtgatactgctttatgataatgaatatagaaatattcaagat
ggcgaattaaaggcactctatgtaggtatcactagagctaaaacatcactttctatccat
actaaccatgctgtatttgatcaaatatctacaaataatattcatagagtaattgatgaa
agtcctcatataagatcagataggttagttgtacaatcaggacacaaaggaattaattta
gggtattctaagtttgttcaaaaaaatatagcgaatgcattaccgggaaataaattagaa
cttattgatgagaatatattaacatttaatggtagaaaagtattaaagttttctaacgcc
actcaaaatcagattagtgatttacttgaaaaaggatataagcttactgatggtagtatt
gatcacatggtgtactggtttgatagaacagatgaatcatataatttaattgtattacca
gaactcatatttgatgatgtaggtacattggagaatgatgtctataaaaaagtagaaaat
tcatga
DBGET
integrated database retrieval system
