KEGG   Acholeplasma oculi: Aocu_06260
Entry
Aocu_06260        CDS       T03695                                 
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
  KO
K18692  ATP-dependent RNA helicase CshB [EC:5.6.2.7]
Organism
aoc  Acholeplasma oculi
Brite
KEGG Orthology (KO) [BR:aoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoc03019]
    Aocu_06260 (cshA)
   03009 Ribosome biogenesis [BR:aoc03009]
    Aocu_06260 (cshA)
Enzymes [BR:aoc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Aocu_06260 (cshA)
Messenger RNA biogenesis [BR:aoc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Aocu_06260 (cshA)
Ribosome biogenesis [BR:aoc03009]
 Prokaryotic type
  rRNA helicases
   Aocu_06260 (cshA)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII PhoH DNA_pol3_delta AAA_19
Other DBs
NCBI-ProteinID: CDR30699
UniProt: A0A061ABD7
LinkDB
Position
1:692965..694230
AA seq 421 aa
MTIEKMLETLEFKELSLIQQKVIESFDKANHIVGLAPTGTGKTHAYLFPLLSRLKRVPNE
VEAIILLPTNELVNQVAQMIEKTDPEVSFKSYFGSLDMEREATRLKNQHPNLIVTTPSKL
IDLVIHKNALNIKHIKYFVLDEADMMFDEDFMSMIDPVLVNQNVEKFLLFSASITRSMEP
FIKKYFGQHLLIDTTKHVELKIKYKLLKVNEQRIKQLSELLDHLNPYLCIIFVSKNEDIQ
RVYEMILDKGLNVASFSSLIGVKQRRKLLEDIHDLKYQFIVSSDLLARGIDFKASHIIHY
DLPYKLEFFLHRSGRTGRMGDTGEVITLYDSNDQPKIDKLKNKGIPFEPYTLTDDGLKTL
RRKSKTYDKKIANEIKKIPKAKKVTPGYKKKRAIKVKEAVKKIKKARYRDASFRKSRQSE
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgactatagaaaaaatgttagaaacgcttgaatttaaagaactttctttaattcaacaa
aaagtaattgaatcttttgataaagctaatcatatcgtaggtttagctcctactggaacg
ggtaaaacacatgcctatctttttccattattatcaagattaaagagagttccgaatgaa
gtagaagctattattttattaccaacgaatgaacttgttaatcaagtagcacaaatgatt
gaaaaaacagatcctgaagtatcctttaaatcttattttggttcgttggatatggaaaga
gaagcaacaagacttaagaatcaacatcccaatttgattgttacaacaccgtctaaatta
attgatttagtaattcataaaaatgcattaaatattaaacatataaagtactttgtttta
gatgaagcggatatgatgtttgatgaagattttatgagtatgatagatcctgttttagtc
aaccaaaatgttgaaaaattcttacttttttcagcaagtatcactcgaagcatggaacca
ttcattaaaaaatattttggacaacatttattaattgatacaaccaaacatgttgaatta
aaaatcaaatataaactacttaaagtcaatgagcaaagaatcaaacaattatctgaattg
ttggatcatttaaatccttacttatgtattatttttgttagtaaaaacgaagatattcaa
agagtttatgaaatgattttagataaaggattaaatgttgcaagcttttcttcactcata
ggcgttaaacaacgcagaaaattacttgaagatattcatgatttaaaatatcagtttatt
gtatcaagtgatttactagcaagaggtattgattttaaagccagtcatatcattcattat
gatttaccttataaattagagtttttcttacatcgaagcggtagaaccgggcgtatggga
gatacaggtgaggttattacattatatgattcaaatgaccaacctaaaattgataaacta
aaaaacaaaggtataccttttgaaccttatacgctaacggatgatggtttaaaaacactt
agaagaaaatctaaaacatatgataaaaaaatagcaaatgaaatcaaaaagatacctaag
gcaaaaaaagtaacaccagggtataagaaaaagcgcgcaatcaaagttaaagaagctgtt
aaaaaaattaagaaagcgagatatagagatgctagttttaggaagtcacgtcagtctgaa
gggtga

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