Acholeplasma oculi: Aocu_06990
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Entry
Aocu_06990 CDS
T03695
Symbol
yrrC
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aoc
Acholeplasma oculi
Pathway
aoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Aocu_06990 (yrrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoc03400
]
Aocu_06990 (yrrC)
Enzymes [BR:
aoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Aocu_06990 (yrrC)
DNA repair and recombination proteins [BR:
aoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Aocu_06990 (yrrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
AAA_29
nSTAND3
PhoH
AAA_28
UvrD-helicase
AAA_12
Helicase_RecD
T2SSE
DHNA
AAA_16
cobW
SLFN-g3_helicase
RsgA_GTPase
AAA
AAA_14
AAA_5
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CDR30772
UniProt:
A0A061AII6
LinkDB
All DBs
Position
1:771896..774124
Genome browser
AA seq
742 aa
AA seq
DB search
MENTIKGFVKNYVYRNEDNGYTIARLTTNNGKVVTIVGYFPLLSEEMEYEFKGEMIEHPK
YGEQLKVISYERLDDMSENGLVRYLSSDNFTGIGPKTAQKIVDLLGMDAISKILEDELSL
APILNPIKRVRLKKELIHHQLEHMIFIKLMDYGLTSKVATKLYKTYQHQTLEKLEEDPYR
LMYEIDGFGFIKSRDIAEKMGVAKEDIRSLKAAIVYTLETTAFGEGDLYLNINELGQRVK
KILDIDVDYQEAIDILLKEGKIILENNQYFLSPIYEAEKAIAKRVIELKNQSLHTFDDDL
LKLMLSQISLQKSIDYTEKQVEAILTAIKNPFTIITGGPGTGKTTLIDGLLTLYANYQKL
KLSDPYTRDEIALMAPTGRAAKRMEELLNFPARTIHSHLGFDFGKSFKYDKRSPLPHKLI
IIDEASMIDIFLMKYLLESVRDDASVVIVGDVDQLPSVGPGYVLGDMIQSGVIHVIRLNE
IHRQAKESHIIKLATAINQQVLTKELLTSHEDVIFYKGDHEQIKHVILNQIEGAIHKGYD
LIEDIQVLIPQYKGELGIDRMNQEIQKKFNPNYKKGLHMTYGDKSYYVGDKVIQLQNDRD
KEIMNGDIGVVKDIQRNEKDQLQMTVLFDSNEVRFDTADLENLNLAYVISIHKSQGSEYK
IVFLPIIRNYLHMLKKELIYTAITRAKQYLLILGDMNLLQYASNQLVEKRHTMLQKRLTS
NDKDSDSSENNEEEALSPYDFM
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacgattaaaggtttcgttaaaaattatgtatatagaaatgaagataatggt
tatacgatagccagactcacaaccaacaatggtaaagtagttactattgttggttatttt
ccattattaagtgaagaaatggaatatgaattcaaaggtgaaatgattgaacatcctaaa
tatggagagcaattaaaagtcatcagttatgaacgtcttgatgatatgtcagaaaatgga
ttggttagatacttatcaagtgataattttacaggtattgggcctaaaactgctcaaaag
atcgttgatttacttggtatggacgctatctcgaagatattggaagatgaactttcactc
gctccaattctaaatcctataaaaagagttcgtttaaaaaaagaattaattcatcatcaa
ttagaacatatgatatttattaaactaatggattatggtctaacatccaaagtagcaaca
aaactttataaaacctatcaacatcaaactctagaaaaattagaagaagatccatatcgc
ttaatgtatgaaatcgatggatttggatttattaaatccagagatattgctgaaaagatg
ggtgttgcaaaagaagatattcgttcattaaaggcagcaattgtttacactcttgaaact
acagcatttggtgaaggtgatctatatttaaatataaatgagcttggacaacgtgttaaa
aagattttggatatcgatgtggattatcaagaagcaattgatatattactcaaagaaggt
aaaattattcttgaaaacaatcagtactttttatcaccaatttatgaagctgaaaaagcg
attgcaaaaagagttatcgaactaaaaaatcaaagtctacatacatttgatgatgactta
ttgaagttaatgctttcacaaatatcacttcaaaaatcaattgattatactgagaaacaa
gttgaagcaattcttactgctattaagaatccttttaccatcataaccggtggaccagga
acgggtaagacaacactgattgatggtttattaacgctttatgcaaactatcaaaaatta
aaattaagtgatccatatacaagagatgagattgcattaatggcacctacaggtagagcg
gctaaaagaatggaagaattattgaattttccagcaagaacaatacattctcacttagga
tttgattttggtaaatcttttaaatatgataagcgttcaccattacctcataaattaatt
atcattgatgaagcatcaatgattgatatttttctcatgaaatatttattagaatctgtc
agggatgatgcatctgtagttattgttggtgatgttgatcaattaccatctgttggtcct
ggatatgttttaggtgatatgattcaatcaggagttatccatgtcattcgtttaaatgaa
attcatagacaagcgaaagaatcacatattattaaacttgcaactgcaattaatcagcaa
gttttaacgaaagaactcttaacaagtcatgaagatgtaatcttttataaaggtgatcat
gaacaaattaaacatgtgattctcaaccaaattgaaggtgcaattcataagggttatgac
ttaattgaagatattcaagtactaattcctcaatataaaggagaattaggaattgatcgt
atgaatcaagaaattcaaaaaaagtttaatcctaactataaaaaaggactacatatgact
tatggtgacaaaagttactatgtaggtgataaagttattcaacttcaaaatgatcgcgat
aaagaaattatgaatggtgatattggagttgtaaaagacattcaaagaaatgaaaaagat
caacttcaaatgactgttttatttgattctaatgaagttagatttgatactgctgattta
gaaaatctcaatcttgcatatgtgatatcgattcataaatcacaaggatctgaatataaa
attgtctttttaccaattattagaaactatttacatatgttgaaaaaagaacttatctat
actgcaatcactagagcgaagcagtacttactcattttaggcgatatgaatttacttcaa
tatgcatcgaatcagttagtcgagaaaagacatacgatgttacaaaaaagattaacatca
aatgataaggattcagattcatctgagaataatgaagaagaagcgttaagtccatatgat
ttcatgtaa
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