Acholeplasma oculi: Aocu_10980
Help
Entry
Aocu_10980 CDS
T03695
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aoc
Acholeplasma oculi
Brite
KEGG Orthology (KO) [BR:
aoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoc03032
]
Aocu_10980 (topA)
03400 DNA repair and recombination proteins [BR:
aoc03400
]
Aocu_10980 (topA)
Enzymes [BR:
aoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Aocu_10980 (topA)
DNA replication proteins [BR:
aoc03032
]
Prokaryotic type
DNA Topoisomerases
Aocu_10980 (topA)
DNA repair and recombination proteins [BR:
aoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Aocu_10980 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
DUF881
DUF2256
Motif
Other DBs
NCBI-ProteinID:
CDR31171
UniProt:
A0A061AHV6
LinkDB
All DBs
Position
1:complement(1186367..1188154)
Genome browser
AA seq
595 aa
AA seq
DB search
MKDLVIIVESPAKSKTISSYFDNKVTVLSSVGHIRDLATSGVDGLGVNVLDTFEPTYKVI
KGKATLIKDLIKKTKGKEVLLATDPDREGEAIAWHLAQVLDLDIEEKNRIIFKEITKPAV
LEAINQKRTIDKGLVNSQESRRILDRIIGFKLSKFLRNKIKSQSAGRVQSVALKLIVELE
KEILAFVPETYYTIHAHFGDLRAEYIIPKDYKIKLEEANQILETSKNPFTIISIDEKESK
RNAKPPFITSTLLQDAVNSLSMSSARTMQIASELYQGIDIEGELIGLITYMRTDSDRLSK
EFVDPANKYIEEHFGKKYLGHYKTNKKDSQQDAHEAIRPTDLHLTPQRVEQYLSKDQFKL
YKRIYERALGSLMAPAIFNLKKVKLDAGGNIYELDGSQQIFDGYLKVVTDKSKDKILPPY
QVGDRLESDLVESIEKVTMPPARYNEASLIKDLESKGIGRPSTYATIIKTLKSRDYVTVE
EKRFKPTEQGILTVDTLNTYFSDIMNTDYTSRMENELDMIAEGSVNGVELLKDFYQRFVP
LLEKADQQLERIKPVISDKICPLCGKPLAIRKSKYGQFYGCTGFPKCKHIEPFEN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttagtcataattgtagaatctccagctaaatctaaaaccatttcaagttac
tttgacaataaagtaactgttttgtcgtctgttggacatattagagatttagcaacctct
ggtgtggacggactaggcgttaatgttttagatacgtttgagcctacctataaagtcatt
aaaggaaaagctacactcatcaaagatttaattaaaaaaactaaaggtaaagaagtttta
ctagctaccgaccccgatagagagggagaagcgattgcttggcatttagctcaagttctt
gatttagatattgaggaaaaaaatcgtattatatttaaagaaattacaaaacctgctgta
ttagaagcaatcaatcaaaaaagaacaattgataaaggattggtaaattctcaagaatct
agacgtatactagatagaatcattgggtttaaattatctaaattcttacgaaacaagatt
aaatctcaatctgctggtcgtgtacaaagtgttgcattaaaactcattgtagaacttgaa
aaagaaattttagcatttgttccagaaacatattatacaattcatgctcattttggtgat
ttaagagcagaatatatcattcctaaagattataagattaagttagaagaagctaatcaa
atcttagaaacttctaaaaatccatttacaatcattagtattgatgaaaaagagagtaag
agaaatgcaaaacctccatttattacatcaaccttacttcaagatgcagtgaattcactt
tcaatgagttctgctagaacgatgcaaattgcatctgaactttatcaaggtatagatata
gaaggagaactcattgggttaatcacttatatgagaacggattctgatcgtttaagtaaa
gagtttgtagatcctgctaataaatatattgaagaacatttcggtaaaaaatatttaggt
cattataaaacgaataaaaaagactctcaacaagatgcccatgaagcaatcagaccaaca
gacctacatttaacgccacaaagagttgaacaatatttaagcaaagatcagtttaaacta
tacaaaaggatttatgaacgtgcattagggtccttaatggcacctgctatcttcaacttg
aagaaagttaaactggatgctggtggaaacatctatgaacttgatggtagtcaacaaatc
tttgatgggtacttgaaagtcgtaacagataagagtaaagataaaatcttacctccatat
caagttggtgacagattagaatctgacttagttgaatctattgaaaaagtaacgatgcca
cctgctagatataatgaagcatctttaattaaggatttagaatctaaaggtattggaaga
ccatccacctatgcaacaattattaagacattaaagtcaagagattatgttacggttgaa
gaaaagagatttaaaccgacagaacaaggtattctaactgttgatacattaaatacttat
ttcagcgatatcatgaatactgattatacatctcgtatggaaaatgaactggatatgatt
gctgaaggttctgttaatggtgttgaactgttaaaagatttctatcaacgatttgtcccg
ttattagaaaaagcggatcaacaattagaaagaatcaaaccagtgatttcagataaaata
tgtccactttgtggaaagccactcgcaattagaaagtctaaatatggacagttctatggc
tgtactggatttcctaaatgtaagcatattgaacccttcgaaaattaa
DBGET
integrated database retrieval system
