Acholeplasma oculi: Aocu_12260
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Entry
Aocu_12260 CDS
T03695
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aoc
Acholeplasma oculi
Pathway
aoc03030
DNA replication
aoc03430
Mismatch repair
aoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Aocu_12260 (dnaE)
03430 Mismatch repair
Aocu_12260 (dnaE)
03440 Homologous recombination
Aocu_12260 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aoc03032
]
Aocu_12260 (dnaE)
03400 DNA repair and recombination proteins [BR:
aoc03400
]
Aocu_12260 (dnaE)
Enzymes [BR:
aoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Aocu_12260 (dnaE)
DNA replication proteins [BR:
aoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Aocu_12260 (dnaE)
DNA repair and recombination proteins [BR:
aoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Aocu_12260 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
RRM_1
Motif
Other DBs
NCBI-ProteinID:
CDR31299
UniProt:
A0A061AD03
LinkDB
All DBs
Position
1:complement(1343063..1345999)
Genome browser
AA seq
978 aa
AA seq
DB search
MVGSLYIQSEYSMKNSTLKLERLFQLAKESGWDFVGIADDANLHALYKALKLSESYQIPV
IIGMRLSLKVEESLVDFLCYAKDSTELKHLIYLSSLISMNSRLEIDDLLDELKQVTLVLP
SIQPIFNDITDIDILKDKVLKIIKLIPTIHFGLSLQHEFNQISHVFYEIAKTYKRFILPT
HQMNYASQEEKRSYDILKSIENTQYVEEISSKAFMNAFELRKLYKDYGFMFEHMDRLFGK
TTYDYVHQTFDLPKYPTVKDTTSKDYLSALSILGLKKRLSKQQYASIEIYQKRLLYELDV
IHQMGYDDYFLIVYDFVRFAKTNDILVGPGRGSAAGSLVAYCLGITEVDPIQYDLLFERF
LNINRRTMPDIDLDFPDHKRDKVIEYVMHKYGKKHVVTISTFTTFAQKSSIRDIAKIMKI
DSQRAGAILKSYINNHLDDTDFEAVDLIQVSKSIEGLPRQTGTHPAGIIISHEDLSHHIP
LMTGPKEVLQSQLEASDLEALGFLKIDFLGLKNLSIIEDVLKLENYPIKLSDIPLDDPST
YQLLKDGDVDGIFQLESFGMRQTIRKMKPDKFEDIVALLALYRPGPMIFIDEYIERLHGK
PYEGLDPSIDDILKPTYGIIIYQEQIMKILNEFAGFSYAEADIIRRAISKKVREVIESEK
IRFIQRSNENGKDAHLAEKIYDAIERFADYGFNRSHSVAYALLAYQMAYLKTHYKASFMA
VLMTNVAQNSELIKSYMETLHLNGIDMLPPDINLSLDQFIVKGQTLIAPLTMIKGIGPSL
VQKIKVIRGEKPFVDYQDFKQRTHDTLNEKVVESLIYSHALDGFGLTKASLIQQLGYQTF
GFESFIKDFKEKNEVEFDFEVLKEKEFEVFGFNIKYKHNPMIQELHKKYNIKSFKLEDEH
VRTIGRITKVKVIETKQKQTMAFIQFESDYTVELILFPKAYEQYEKLLNEPYVLVEISKN
KEKTNNDYIIKHIEKVKV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtagtctgtatattcaaagtgaatactccatgaagaattcaacgcttaaactt
gaacgtttgtttcagcttgccaaagaaagtggttgggattttgttggaattgcagatgat
gctaatcttcatgctttatataaagcattaaaattatcagaaagttatcaaattcctgta
atcataggaatgagactaagtttaaaggtagaagaaagtttggttgattttttatgctat
gccaaagattcaactgagctcaaacatttaatctatttatcaagtttaatttcaatgaat
tctcgtttagaaatcgacgatttactggatgaattaaaacaagtcacgcttgttttacca
agtatacaacctatctttaatgacataacagatattgatatattaaaagataaagtttta
aaaatcatcaaattaatacctacgatacactttggtttatcgcttcaacatgagtttaat
caaatatctcatgtattttatgaaatagctaagacatataaacgattcatattacctaca
catcaaatgaactatgcatcacaagaagaaaaaagaagttatgatattctaaaaagtatt
gaaaatacgcaatatgtagaagagatttcatcgaaagcattcatgaatgctttcgaatta
agaaaattgtataaggactatggctttatgtttgaacatatggataggttgtttggtaaa
acaacatatgattatgttcatcaaacatttgaccttccaaaatatcctactgtaaaagat
acaacgagtaaggattatttaagtgcattatcaatattaggacttaaaaaaagattatct
aaacaacaatatgcatccatagagatatatcaaaaacgattgttatatgaacttgatgtg
atacatcaaatggggtatgatgattattttttaattgtctatgattttgtcaggtttgct
aaaacaaacgatatattagttggacctggaagaggaagtgcagcaggaagtttagttgca
tattgtttaggaattacagaagttgacccaattcaatatgatttattatttgaaagattt
ttaaatattaatcgacgcaccatgccagatattgatttagatttcccagatcataaaaga
gataaagttatcgaatatgtgatgcataaatatgggaaaaagcatgtcgtaactatatct
acttttacaacatttgcacaaaaatcatccatcagagatattgctaaaatcatgaaaatt
gattcacaaagagcaggagcaattctaaagagttatatcaataatcatttagatgatacc
gattttgaagctgttgatttgattcaagtttcaaagtcgattgaaggtttaccaagacaa
acaggaacacatcctgcgggtataataatttctcatgaagatttaagccatcatattcca
ttaatgactggacctaaagaagttttacaatcacaattggaagcatccgatttagaagcg
ttaggatttttaaagattgattttttagggttaaagaacttaagtattatagaagatgtt
ttaaaactagaaaactatccgattaagttaagtgatattccacttgatgatccctctaca
tatcaattattaaaagatggagatgtggatggaatctttcaattagaatcatttggtatg
cgacaaaccataagaaaaatgaaaccagataaatttgaggatattgttgcattactcgca
ttataccgaccgggtccaatgatatttattgatgaatatattgaaagactacatggtaaa
ccatatgagggattagatccatccattgatgatattttaaaaccaacgtatggaatcatt
atttaccaagaacaaatcatgaaaatattaaatgagtttgctggatttagttatgctgag
gcagatatcattagaagagctatttctaaaaaggttcgtgaagtgatagaaagtgagaaa
atcagattcattcaaagatcgaatgaaaatggaaaagacgctcatttggctgaaaagata
tatgatgcgattgaacgctttgcagattatggatttaatcgaagccatagtgttgcatat
gcattattagcgtatcaaatggcatatttaaaaacacattataaagcatcatttatggct
gtattaatgacgaatgttgcacaaaacagtgaacttattaaatcttatatggaaacactt
catttaaatggtatcgatatgttaccacccgatatcaacctgagtcttgatcaattcatt
gttaagggtcaaacactaattgcaccccttaccatgattaaaggtattggaccttcattg
gttcaaaaaattaaagttattagaggtgaaaaaccctttgtggactatcaggactttaaa
caaagaacacacgataccttaaatgaaaaagtcgttgaatccttaatttatagtcatgca
cttgatggttttggattgacaaaagctagtcttattcaacaattgggttatcaaacgttt
ggatttgaaagtttcattaaagattttaaagagaaaaatgaagttgaatttgattttgaa
gtactcaaagaaaaagaatttgaagtttttggatttaatataaaatataaacataatcca
atgattcaagaacttcataaaaaatataacattaagtcattcaaattagaagatgaacat
gtaaggactataggtcgtatcactaaggttaaagtcatagaaacaaaacaaaaacaaacc
atggcctttattcaatttgaatcagattatacagtagaactgatattgtttccaaaagct
tatgaacaatatgaaaaactgttaaatgagccttatgtgcttgttgaaatatcaaaaaac
aaagaaaaaacaaataatgattatataataaaacatatagagaaagtgaaggtataa
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