Amphiprion ocellaris (clown anemonefish): 111562565
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Entry
111562565 CDS
T06018
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111562565
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoce01009
]
111562565
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111562565
Protein phosphatases and associated proteins [BR:
aoce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111562565
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Protocadherins
111562565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Neur_chan_memb
MAP17
Motif
Other DBs
NCBI-GeneID:
111562565
NCBI-ProteinID:
XP_023116923
Ensembl:
ENSAOCG00000019447
LinkDB
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Position
1:5629839..5844573
Genome browser
AA seq
1236 aa
AA seq
DB search
MDLKDYYLLGTLLACIWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGNPQKSSTAILQVT
VTDVNDNRPVFKESQIEVHIPENSPIGTSVVQLQATDADIGANAEIHYVFGTQVSPATKR
LFALNTTSGLITVQRPLDREETAIHKLSVLASDGSSSPAKATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQTQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPAVTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
TLIYDLIRRTMETPIDRNIGESSETYQSGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPDDPAHEPIN
GTISLPTELEEQGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPMHTRQQGTLTRART
ELNPEYLDLRPRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGSLL
TQPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPTLGSYQQPKSPVSSFGSQREWGPKDKLLNGHTLTRTWKNESGRSEHFGDRKQFG
SGEGHFTSSGMADIPLVSLKSCQPASCPDSPKDQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaagactattacctgttgggcacccttcttgcctgcatatggctcgatcct
tcaatagcccaagagctaatctaccccatccgagaggagctgcaagaaaacgtcctcatt
ggaaacataccaaaggacctgaacatttcccatacaaatgctgccactggagcaagtgct
aatctcgtgtaccgactcgtctccaaagcaggagataacccactggtccgcgttctgagc
agcactggagagatattcactacatcaaaccggatcgacagggagaagttatgccccggc
ccctcgtttgaggacagcgagtgctcctttgaaatcgaagtggtcatcctgcctaatgat
tatttcaggctgattaagatcaaaataatcgtcaaagacacaaacgataatgcccccatg
ttcccgtcccctgtgatcaacatctccatcccggagaacacgctcattaacagccgcttt
gccattccttctgccactgacccagacactggccccaacagtgtccacaaatacgagctg
atcaatgggcaaagtgccttcggcttagacatagtagaaacgccagagggggagaagtgg
ccccagctcattgtgcagcagaatctggacagagagcagaaggatacatatgtgatgaag
attaaagtagaggatggtgggaatccacagaaatccagcactgccattctgcaggttact
gtcacagatgtcaacgacaacagaccggtctttaaagagagtcagatagaggtgcatata
ccagagaactcccctattggcacgtctgtggtgcagcttcaggccacagatgcagacata
ggggcaaacgcagagatacattatgtatttgggactcaggtgtctcctgctacaaaaaga
ctgtttgcattaaatacaacatctggcctgattacagtgcaaaggcccctggacagagag
gagactgctattcataagctctctgtcttagctagtgatggcagctcaagtccagccaaa
gctactgttacaataaatgtgactgatgttaatgacaatccacctaatatagacctgaga
tacataatcagtcccattaatggcactgttttcctctctgagaaggatcccatcaatacc
aagatagctctcatcacagtgtcagacaaagacactgacatcaacggcaaggtcatttgt
ttcatagagaaggatgtgcccttccatctcaaagctgtgtatgacaaccaatacctatta
gagacatctgcactgctcgactatgaagggacgaaggaatacaactttaaaattgtggct
tctgactctggaaaaccgagcttgaatcagactgccttggtgagagtgaggctggaggat
gagaatgacaatccgcctatttttactcagccagttattgagctggctgttatggaaaac
aacaaacgcgacctgttcctcactactctcagtgccacagacgaggacagcgggaaaaat
gcagagatagtgtatcagctgggaccaaatgcttcattttttgatctcgaccgcaaaacg
ggggtcctgactgcatccagggtttttgaccgagaggatcaggataggttcctcttcact
gtaacggcaagagataacgggacgccccctctgcaaacgcaggcagccgtcattgtaact
gtgcttgatgaaaatgataacaaccccaagttcacacataaccactttcaattctttgtg
tctgagaatcttcctaaatacagcactgtgggggtgataactgtgacagattcagatgct
ggagaaaatgctgctgtttctctttctatactgaatgacaatgagaactttatactagat
ccgtactctggggtgataaaatctaatgtgtcatttgatagggagcagcagagctcctac
acttttgatgttagggctgtggacagtggcaggcctccctgctcttcagctgcaaaggtg
accatcaatgtcatcgatgtgaatgacaacacccctatcgtcatctaccccccctccaac
acgtcttttaagcttgtccctctctcctctatcccaggatctgtggtagctgaagtgttt
gcagtagatggtgatacagggatgaatgcagaactcaaatacactattgtcagtgggaac
aacaagggtctgttcagaattgaccctgtcacggggaatattactctggaggaaaaacca
gctgtaactgacataggcttacacagattagtggtcaacatcagtgaccttggatatcct
aaatctcttcatactctggtgctggtatttctgtacgtcaatgacactgtgggaaactcg
acgctcatctatgatctcatccgacgcaccatggagaccccgatagaccgaaacattggg
gaaagcagcgaaacttatcaaagtggtgactatttaaccataatgatagcctttgttact
ggcgccttagtggtgattattgtcatctttgtcactgtgctgctgcgttgccgccacgct
tccaggttcaaagctgcgcagaggaaaaaacaaggggctgagtggatgtcacccaacaca
gaaaacaagcagaacaagaagaaaaagcgcaagaaaagaaagtcccccaaaagctccctg
ctcaactttgtcaccatcgaggggaacaaacccgacgatcctgcccacgagccaatcaat
ggaaccatcagtctgcccaccgagctggaggagcaagggattggacgctttgattggaat
gccacacctaccacaaccttcaaaccgagcagcccagacctggcacggcactacaagtcc
gcctcgccgcagtcggccttccacctcaaggccgacacgccggtctcagtgaagaagcat
cacgtgattcaggagctcccattggataacacatttgttgggggctgtgacaccctttcc
aagagatcctccacgagctccgaccacttcagtgcctcagagtgcagctcccaaggaggg
ttcaagacgaaggggcccatgcacaccagacagcagggaacattaactcgtgcccgaact
gaactgaaccctgaatatctggaccttcgtccgcgagctgagctgaaccctgaatattgg
acaccttgcacccctttatcacagcggcgcgtcacgtttcacctgccggatggctctcag
gagagctgcagtgacagcggtctgggggaccacgagcctgtaggcagtggctccctcctc
acacaacctctccctctggtgcaggcgcaggacgacttctacgaacaggcctcccctgat
aagaggactgaagctgacggcaactccgatcccaactctgatggcccactgggaccacga
ggcctagtggaagctacagagatgtgcacacaggagtgccttgtcctaggacattcagac
aactgttggatgcccccaacactgggatcataccagcagcctaagtcccccgtgtccagc
tttgggtctcagagagagtggggtcccaaggacaaactcctcaatggacatactctgacc
agaacctggaaaaatgagagtggtcggtcagagcattttggtgacaggaagcagtttggg
agcggagagggacacttcaccagcagtggcatggctgatattccattggtgagtctgaag
tcctgccagccagcctcctgcccagacagccccaaggaccagcagctataa
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