Amphiprion ocellaris (clown anemonefish): 111562661
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Entry
111562661 CDS
T06018
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
aoce05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111562661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111562661
Spliceosome [BR:
aoce03041
]
Common components
Common spliceosomal components
SR proteins
111562661
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111562661
NCBI-ProteinID:
XP_023117086
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All DBs
Position
5:14628590..14637562
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AA seq
340 aa
AA seq
DB search
MPRVYVGKLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKEL
CGERVVIEHARGPRRDGYGYGGRSSSYSSWNRSGRDKYGPPVRTEHRLIVENLSSRCSWQ
DLKDFMRQAGEVTYADAHKGRANEGVIEFRSRSDMKRALEKLDGTDINGRKIRLVEDKPR
HRRSYSGSRSRSRSRRRSHSRRSRSSHSRSRSHSHSRSRSKHRSHSRSKRKSHSKSPEKS
RSHTCKSQSPSKSKKSRSHSDTRKSRSKSRSKVKAERKSQSRSKEKSSIKKSRSHSRSRS
KSRNEKHASKSPLGENSKSPAKRSASRSKSRSRSRSASQD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggtgtatgtcggcaagcttagctatcacgttcgagagaaagacattcagaga
ttttttagcggttatggcaaattgttagagatagacctgaaaaatgggtatggctttgtg
gagtttgaggacatgcgggatgctgatgatgctgtgtatgaactgaatggaaaggagctg
tgtggggagcgcgtcgtcattgagcatgcccgtggaccgaggagggatggatacggctat
ggagggcggagtagcagctacagcagctggaatcgctccggcagagataagtacgggcca
cctgtacgcactgagcaccgcctcattgtggagaacctgtccagcaggtgcagctggcag
gaccttaaggactttatgcggcaagcaggtgaagtaacctacgctgatgctcataaagga
cgagccaacgagggcgtcatcgaatttcgatcccgttcagacatgaaacgagctttggaa
aaactagacggcactgatattaatggaaggaagatccgtctggtggaagacaaacctcga
caccggcgctcatattctggcagcagatccaggtctcggagcagacggcgctctcacagc
cgaagaagtagaagctctcacagtcggtccagatctcactcacattctcgatctcgcagc
aagcaccgctctcactccagatcgaaaagaaagtcccactccaaatctccagagaagtcc
cggtcacacacttgcaaatctcaaagtccctccaagagcaaaaagtctcgctctcactca
gacactcgcaagtcacgctcaaagagcagatccaaagtcaaagccgaacgtaaatcccag
agtcgttccaaggagaaatcttccattaagaagtctagaagccactcgcgctcccgttca
aagagtagaaatgagaaacatgcctcaaaatcacctcttggcgagaactccaagtcccca
gcgaagcgctcggcctcccgctccaagtctcgctctcgatccagatcagcctctcaagac
tga
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