Amphiprion ocellaris (clown anemonefish): 111562778
Help
Entry
111562778 CDS
T06018
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X3
KO
K08367
runt-related transcription factor 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111562778 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111562778 (runx1)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
111562778 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
111562778
NCBI-ProteinID:
XP_023117267
Ensembl:
ENSAOCG00000032057
LinkDB
All DBs
Position
24:7986050..8049470
Genome browser
AA seq
483 aa
AA seq
DB search
MVFLWDAKYDPAPGRRYTPPSTTLASGGKMAEALPLGAQEAGGGAALVGKLRMADRGMVE
VISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGNDENY
SAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGP
REPRRHRQKMDEVKPGSLAFSERLTELEQLRRSSMRVTPPHHHHHQPSANSRQSAALNSA
TFSNPTHTQIAADSRQMQTSPSWSYDQSYPYLGQITTPTVHTANPLSPGRSSLSDLSSRL
TGPDLTAFGDPRVTLERPFSSLPSLPDSRFSDPRVHYPPTAAAFTYTPSHNPVSNGALGI
TMATAMATTPAGRYHTYLPPPYPANTPHQAQNGPFQSTSSPYHLYYSTAAGSYQFSMMAG
GGGTNDSRSPPRILPPCTNASTGSSLLHPSLPNQSDGVGVEVESSHSSSPTNMAAAEAVW
RPY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctgtgggacgcgaaatacgacccagcccctggccggcgctacactcccccc
tccaccactctcgcctcgggggggaagatggccgaggccctgcccctgggagcccaggag
gccggtggaggggcagctctggtgggcaaactgcgaatggctgaccgcggcatggtggag
gtgatctcagatcatccaggcgagctggtgaagacggacagccccaacttcctgtgctct
gtgctgccgactcactggaggtgtaacaagactctgcccatcgcttttaaggtggttgcc
ctgggcgacatccccgatggcaccttggtaacagtgatggccggaaacgacgagaactac
tccgcggagcttcgcaacgccacggctgccattaagaaccaagtggcccgattcaatgac
ctgcgcttcgtcggccgcagtggaagaggaaagagcttcacgctgaccatcacagtgttc
accaaccctcctcaggtggcgacgtaccagagagccattaaaatcacagtggatggtccc
agagagccacgacgtcaccgtcagaagatggacgaggtcaaaccgggctccctggcattc
tccgagcggctaacagagctggaacagctgagaaggagctccatgagggtgacgcctcct
caccaccatcaccaccaaccctcagccaacagccgccaatctgccgcactcaactccgcc
accttctccaaccccacgcacactcagatcgctgctgactccagacagatgcagacgtct
ccatcttggtcctacgatcaatcatatccctaccttggccagataaccacgcccaccgtc
cacacagccaatcctttatcgcctggtcgctcctcgctcagtgatctgtcatctcgactc
acaggtcctgacctcacagccttcggtgaccccagggtgaccttagaacggcctttcagc
tccctcccttccctgcccgactcccgcttctccgacccccgggtgcactaccctcccaca
gcggccgccttcacctacacaccctcccacaaccccgtctccaatggcgcccttggcatc
accatggcgacagccatggcaaccacccctgcagggcggtaccacacctacctgcctcca
ccctaccctgcaaacaccccacaccaagctcagaatgggcccttccagtccacctcgtca
ccgtatcacctctactactccaccgccgccggctcataccagttctccatgatggccggt
ggaggaggcaccaatgactcgcgctcacccccacgaatcctgccgccgtgcaccaacgcc
tccacaggctcttcactgctgcacccctctttgcccaatcagagtgacggggtgggagtg
gaggtggagtctagccacagtagctccccaacaaacatggctgctgctgaagcagtctgg
agaccttactga
DBGET
integrated database retrieval system
