KEGG   Amphiprion ocellaris (clown anemonefish): 111562860
Entry
111562860         CDS       T06018                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04115  p53 signaling pathway
aoce04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111562860 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aoce04121]
    111562860 (cop1)
Enzymes [BR:aoce01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111562860 (cop1)
Ubiquitin system [BR:aoce04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111562860 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111562860 (cop1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-C3HC4_4 Beta-prop_WDR90_POC16_2nd zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 zf-rbx1 zf-RING_10 WDR90_beta-prop_4th UvrD-helicase Sina_RING zf_C2H2_10
Other DBs
NCBI-GeneID: 111562860
NCBI-ProteinID: XP_023117402
Ensembl: ENSAOCG00000013641
LinkDB
Position
10:5675093..5692890
AA seq 713 aa
MMSSNRPQQNAGGASSVPSTSSSSSTGGTGNTNGGGGSNPVMSNGNNSGNVVPSRSLTAA
SDGVLSVPTLAAVPSSRGGFASLGRPSATSGSRKKSLHQAPLYNGLLNSYEDKSNDFVCP
ICFEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQK
QRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQR
QILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPMMEAECTVPNVEAPSP
APSCSSIIEPTDYSQPPGFGGTTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSR
ITDEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYSGSSIVSSIEFDRDCDYFAI
AGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILW
DGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANV
CCVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSAST
DSQLKLWNVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTF
KFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgatgtcaagcaaccggccacagcaaaacgctggtggggcgagttcggtgcccagcacg
agtagcagcagcagcactggaggcaccgggaacacaaacggtggcggaggcagcaacccc
gtcatgagtaatggtaataattctggaaatgttgtgccctctcggagcctgacagcggcc
agcgatggcgtcttgtcggtgccaactttggccgccgtgccgtcgtcccggggcggcttt
gcctccctgggcagaccgtctgcgacctcgggcagcagaaagaaatccctccatcaagca
cccctgtacaacggcctcttgaattcatacgaggataaaagcaacgacttcgtctgtccc
atttgcttcgaaatgatagaggaggcacacatgaccaagtgtggacacagtttttgtttc
aagtgcatccgccagagcttggaggacagcaacagatgtcccaagtgtaactacatcgtc
gataatgtggatcagctctacccaaattttcttgtaaacgaactgatccttaaacagaaa
caaaggtcagaggagaagagactaaagttggatcatcctaatgggtctcggtggcaggtc
ttccaggatgttttgagtcctgatcaggagaacttggacctggcaaatgtcaacctaatg
ctggagctcctggttcagaagaagaagcagctggaggcagaatcccaagcagctcagaga
cagatcctcatggagtttcttaaagaagccaggagaaacaagagagagcaactagagcaa
ctacagaaggagctcaactttcttgaagaagacattaagcgcgttgaggaaatgagcggg
ctgtactctccgatgatggaggcagagtgtacggtgcctaatgttgaggctccatctcca
gcacccagctgtagtagtattattgagccaacagactacagccaacctccaggatttggt
ggaacaacacagggaaaacgacagacctggtacaacagcactctggcatcaagaagaaag
aggctgacggctcatttcgaggatctggagcagtgctacttctccaataaaatgtcgcgc
atcacagacgagggcaggaacttgaaccagctggatgattttatggagtgtttgtccaag
ttcacccgctacaactctgtgcggcccctggccaccctctcctacgccagcgacctctat
agcggctctagtattgtctctagtattgagtttgaccgtgactgtgactactttgccatt
gctggtgttaccaagaaaatcaaggtgtttgaatacggcactgtgatccaggatgcagtg
gacatccactaccctgtcaacgaaatgacctgcaattcgaaaatcagctgtatcagctgg
agcagttatcacaagaaccttctggccagcagcgactacgagggtaccgtcattctgtgg
gatggattcactggccagaggtccaaagtctaccaggaacatgaaaaacggtgttggagt
gttgacttcaacctgatggaccccaagctcttagcctctggttctgatgacgctaaagtg
aagctgtggtcaaccaatcttgacaactcagtggccagcatcgaagctaaagccaacgtc
tgctgtgttaaattcagcccaacctccagatatcatctggcctttggctgtgcagaccac
tgtgttcactactatgatctacgcaacactaaacagccaatcatggtgttcaaaggccac
aggaaagccgtgtcatacgccaagtttgtcaacggagaggagattgtttccgcttcgaca
gacagtcagctgaagctgtggaacgtcaacaaacctcactgccttcgctccttcaagggt
cacatcaatgagaagaactttgtcggcctggcatccaatggagactacgtcgcctgtggc
agtgagaacaactccttgtatctatactacaaaggactttccaagactctgttaacattc
aagtttgacacagtgaagagcgtcctggacaaggacaagaaggaagacgacaccaacgag
tttgttagtgctgtctgctggagggccctgcctgatggagagtcaaatgtgctgattgct
gcaaacagtcaaggaacaatcaaggtactcgagctcgtctga

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