Amphiprion ocellaris (clown anemonefish): 111562874
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Entry
111562874 CDS
T06018
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111562874 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aoce01002
]
111562874 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111562874 (shhb)
Peptidases and inhibitors [BR:
aoce01002
]
Cysteine peptidases
Family C46: hedgehog family
111562874 (shhb)
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Heparan sulfate / Heparin
Morphogens
111562874 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hom_end_hint
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
111562874
NCBI-ProteinID:
XP_023117420
Ensembl:
ENSAOCG00000025421
UniProt:
A0AAQ5X0Z7
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Position
10:23825529..23837260
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AA seq
417 aa
AA seq
DB search
MDPPRQSKMVLMRAMLSTLLCLLLASASWGCGPGRGYGKRRHPKKLTPLALKQFIPNVAE
KTLGASGKYEGKIIRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISV
MNQWPGIKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWV
YYESKAHIHCSVKAENSVAAKSGGCFPGSSMVILAEGNTKQLKDLQVGDKVLAADQRGNL
VPSDFLMFIDQDQQISREFHVLETDEPCHRLKMTPAHLVFVMNNSTNSSSIRAVFASNVK
PGQWLLVVGNDQSEYLIPARVTRVYVEKYEGSYAPMTSHGTIIVDRVLASCYAVVEDHDL
AHWVFTPVRLWHSFLSLFGMVKELSSVHQADGVHWYPELLYYVGSWLLDRSSFHPQS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatcctccacgtcagtcaaagatggtcctgatgagagcgatgctgtccacgctgctc
tgcctgctgctggcttccgcctcctggggctgtggaccgggcaggggatacgggaagcgg
aggcaccctaagaagctgacaccactagctctgaaacagttcatccccaacgtggctgag
aaaaccctgggagccagcggcaagtacgaaggaaagatcatccgcaactcggaaaggttc
aaggacctgactcccaactataaccccgatattatttttaaagatgaggagaacaccaac
gcagatcggctcatgacacaaaggtgtaaggacaaactgaactctttggctatttcagtc
atgaatcagtggcctgggattaaacttcgggtcacagaaggttgggatgaggatggccat
cattctgaagagtctcttcactatgagggccgcgcagtcgatatcaccacctcagacagg
gataagagcaagtatggcatgctgtccaggctggctgtggaagcgggttttgactgggtc
tactatgagtccaaagcccacatccattgttctgtgaaagcagaaaactctgtggctgct
aagtctggaggatgcttccctggttcttctatggtgatcctagcagaaggaaacacgaaa
caactgaaggacctccaggtgggggacaaggtgctggctgctgatcaaagaggaaacctg
gttcccagtgacttccttatgttcatagaccaggatcaacagatttcaagagagttccat
gtcctggagactgatgagccatgtcatagactgaaaatgactccagctcaccttgttttt
gtaatgaacaacagtaccaacagcagcagcattcgtgccgtgttcgcgagtaatgtaaaa
ccaggacagtggcttcttgttgttgggaatgaccagtcggaatacctcatccctgccaga
gtaacaagggtttatgtggagaagtatgaaggatcttatgcacctatgacatctcatgga
accatcatagttgaccgggttttggcatcctgctatgcagtagttgaggatcatgacctt
gcacactgggttttcacaccagttagactgtggcactcattcttgtcactatttgggatg
gtaaaagaactcagcagtgtgcaccaagcagatggtgtccactggtacccagagctcctc
tactatgtgggaagttggcttctggataggagctcttttcacccgcaaagctga
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