Amphiprion ocellaris (clown anemonefish): 111562898
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Entry
111562898 CDS
T06018
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04020
Calcium signaling pathway
aoce04080
Neuroactive ligand-receptor interaction
aoce04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111562898 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111562898 (grin2ca)
04082 Neuroactive ligand signaling
111562898 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111562898 (grin2ca)
Ion channels [BR:
aoce04040
]
Ligand-gated channels
Glutamate (ionotropic)
111562898 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
111562898
NCBI-ProteinID:
XP_023117455
Ensembl:
ENSAOCG00000012339
LinkDB
All DBs
Position
19:17505364..17574160
Genome browser
AA seq
1411 aa
AA seq
DB search
MGVRLGCLSDSSWWPLLLLLFCTVPYCSGRPFGIPTPSVNVAVVFSGSAYQTEIKGRLSR
ENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQILDFIS
TQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVITSLY
PGYETYVEYIKSFTDTSYFMWDLQDVLTFDMSADSMNDIRARRLLQQIDAQVLLVYCSHE
EAQYLFSMAAEAGLVGPGYIWIIPSLAVGNPDIPPPDSFPVGLISIITDRWRMSLRKRVR
DGVAIVVKGVQSFRKQRGFVPEGHSDCHNPVKASATNDTLFRHMLNVTWEHNDFSFNSNG
YLVNPAMIIITLDRERQWDKVGTYEMGILQMRYPVWPRFGSYLEPVSDYRHLTVATLEER
PFVIVEAVDPVTGTCVSNTVPCRRQSNKTEAIVGHTEPYTKLCCKGFCIDILKKLSRTIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSLVTAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVEQTDRNGSMQSPDVTTNYTQ
ANMLKMLKTAKDMVSSARVENSLDNATKTIENWSRRGADNVRAGLPPRITTTDMTHGRLP
YISSITDNHSPYPQRAITPTFPVHYGDTSTQPLLDKPRVVTRPTPLRYTLPARSSQHVLE
RTLPISSLSSPHIAMRDPVSPGTPNPHHGSRLYVENHARIPTSPFVPYREFQVPDIYVEH
KPPLRRKFSYPPDCVSRRRKSHSYVFDAADPRMRGDYDEPRSCLAELRANHLLNNHAPDA
AAMACTPGHYQGGSTSCNSCMKSYLEPEMDDIPLLGKDKLNRRASFLKATWGNDRIRQVD
ETKPSTSTSPSTRVDMPDLFPRVVVANPKPHKLYGSLGHNLSCYPLAAEPAYLDPAHMGS
YPYKQKLKYSESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPLAQ
GPSQYYNGSKDMCHLFPCTSHCPDNAAMLPRMGDRQVVYHNNMFGAYDGTGKREEPGSGS
RERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgcttgagcgactcctcgtggtggccgctgctgctgctgctg
ttctgcactgtcccctactgttcgggccggccgtttgggattcccacgccctctgtgaac
gtggcggtggtgttcagcggctcggcctaccagacggaaattaagggccgtttaagccga
gaaaatttcatggacctgccgctggaggtgaaccccatcactgtgctggtcaacaacacc
aacccacgggcgctgctcacccgcatctgcgacaccctctccaccaaccgcgtccatggc
gtggtgtttgaggacaacgttggctcggaggccgtggcgcagatcttggacttcatttcc
actcagacagctgtgcccattgtgggcatcagtggaggctctgctgttgtcctgccttac
aagggtgagggctccaacttcctccagctgggatcctccatcgagcagcagatcaatggt
atgttcaaagtgatggaggagtacaactgggacagcttcgtggtcataacgagcctctac
ccaggttatgaaacctacgtggaatacatcaagtccttcactgacaccagctacttcatg
tgggatctgcaggacgttctgaccttcgacatgtctgccgacagcatgaacgacatacga
gcgcggaggctcctgcagcagattgacgcccaggtgctgctggtctactgctcccatgaa
gaagcccagtatctgttttccatggctgctgaggctggactggtagggccaggctacatc
tggattatccctagcctggctgtgggaaacccagatatccctccgcccgatagcttccct
gtggggctcatcagcatcatcacagaccggtggaggatgagcctgaggaagagagttcgg
gatggggtggccattgttgtcaaaggtgtgcagagctttcggaaacaaagaggcttcgta
ccagaaggccacagtgactgtcacaaccccgtcaaggcatcagctactaatgacactctg
ttcaggcacatgctgaatgtgacatgggaacataacgacttctccttcaacagtaacggt
tacctggtgaatccagccatgataatcatcactctggacagagagcgacagtgggacaag
gtggggacctacgagatggggatcctgcagatgagataccccgtgtggccgcggtttggc
tcctacctcgagccggtgtctgattacaggcatctgacagtggccacactggaggagcgg
ccctttgtcattgtggaggcagtggaccccgtgactggtacatgtgtcagcaacactgta
ccctgccgacgacagtccaacaagacggaggcaattgtgggtcacactgagccatacacg
aagctctgctgtaaaggtttctgcatagacatcttgaagaaactgtcccgcaccattaag
ttctcctatgacctctacttggtcaccaacggcaaacatgggaagctggtccggggaatt
tggaacgggatgatcggagaggtgttctacaaacgggcagacatggccatcggctcactg
accataaatgaagagcgctcagagattattgacttctcagtgccatttgtggagacgggg
atcagtgtgatggtggctagaagtaatgggaccgtctctccatctgcttttttggaacct
tacagcccagcagtttgggtgatgatgttcgtaatgtgtctgactgtcgtggccatcaca
gtgtttgtctttgaatactgcagtccagttgggtataaccgcagtctggttactgccaaa
gatcctggaggtcccacctttaccatcgggaagtcagtgtggctgctgtggggaatcgtc
ttcaataactctgtccctattgagaatccaaagggtaccaccagtaaaataatggtcctg
gtctgggctttctttgctgtcattttcctggcttcctacacagctaacctggctgccttc
atgatccaggagcagtacatcgacacagtctctggactgagtgacaaaaagtttcaaaag
ccacaggagcagtaccctccgttccgcttcggtacagtcccaaatggcagcacagagcgc
aacataaggagtaactaccctgagatgcactcccacatggtcaaatacaaccagaaggga
gtagaggatgcccttaacagcctcaaaacagggaaactggatgcttttatctatgatgct
gctgtgctgaattacatggctggcaaagatgaaggctgcaagctggtgaccattggcagt
gggaaagtgtttgctaccactggttatggcatcgccctgcagaaggattcacgctggaaa
cgacccatcgacctggccctgctccaattcctggctgatggtgacacacaaaagctgcag
accgtctggctcacaggtatttgccgtaatgaaaagaaagaggtcatgagcagtaagctg
gacattgacaacatggcgggagtcttctatatgctgcttgtcgccatgggtctgagcctg
ctggtttttgcttgggaacatctgctctactggaaactacgacattcagtccgcaagtcg
gagcgtctggactttcttctcgctatcagtcgaggcatctacagctgcttcaatggagta
gagcaaactgaccgcaatggaagcatgcagagcccagatgtcactaccaactatacacaa
gcaaacatgctaaagatgctgaagacagccaaggacatggtgtcctctgccagagtggag
aactctctagacaatgccaccaaaacaatagagaattggagcaggcggggagctgacaat
gtgcgggctggcctgccacccagaattacaaccacagatatgacccatggtcgtctgccc
tatatctcaagcatcacagacaaccactccccatatcctcagagggccattacacccacc
ttcccagttcattacggggacacgtccacccaacccctcctggataagccccgtgtggta
accaggcccacaccactccgctacacgctgcctgcccgcagcagtcagcatgtcttagag
aggactctgcctatctccagtctcagcagccctcacatcgctatgagggatcctgtttct
cctggaactcctaacccccaccacggcagcaggctgtatgtggagaaccatgcccggatc
cccacatccccatttgttccttacagggagttccaggtgcccgatatctacgtggagcac
aaaccacctctgaggaggaagtttagctacccccctgactgtgtaagccggaggaggaag
tcccatagctatgtgtttgatgctgcagaccccaggatgagaggtgactatgatgaacct
cgctcctgccttgctgagttgagggccaatcacctcttgaacaaccacgcccctgatgca
gctgccatggcctgcactccaggacactaccaaggcggcagcaccagctgcaactcctgt
atgaagtcctacctggagcctgaaatggatgacataccactcctggggaaggacaaacta
aaccgtcgcgcctcattcctcaaagccacatggggcaacgataggattcgtcaggtagat
gaaacaaagccctccacatccacatctccctccacccgagtagacatgcctgacctgttt
ccacgggttgtagtggctaacccaaagccccacaagttatatggcagtctagggcacaac
ctgtcctgctaccctttggctgcagagccagcctatctggacccagcccacatgggttcc
tatccctacaagcaaaagctcaagtactctgagtccacccggctgccctcttacagggaa
gccatcctgcagaatgccgctgctctgcgccgctcctcctccacagtggtgcatagacac
tactccacctacctgaactcatacacagacttaccagtgtatgtggggccactagcccag
ggaccgtcccagtactacaatggttccaaggacatgtgccacttgtttccctgtacaagt
cactgtccagataatgcagcaatgctgcctcgcatgggtgacaggcaggtggtttaccac
aacaatatgtttggggcctatgatggcacaggaaagagggaagagccaggttctgggagc
agagagcggaggcaggtgttggtggcgcgcagagtcaacagtccctatgtgccaaagccc
tggggcagggtatccagcttggagtctgaggtctga
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integrated database retrieval system
