Amphiprion ocellaris (clown anemonefish): 111562917
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Entry
111562917 CDS
T06018
Symbol
itga10
Name
(RefSeq) integrin alpha-10 isoform X1
KO
K06586
integrin alpha 10
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
aoce04810
Regulation of actin cytoskeleton
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111562917 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111562917 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111562917 (itga10)
04810 Regulation of actin cytoskeleton
111562917 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111562917 (itga10)
Cell adhesion molecules [BR:
aoce04515
]
Integrins
Integrin alpha subunits
111562917 (itga10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
vWA_SIBA-E
ITGAX-like_Ig_3
EIF3I
Motif
Other DBs
NCBI-GeneID:
111562917
NCBI-ProteinID:
XP_035800087
Ensembl:
ENSAOCG00000011628
LinkDB
All DBs
Position
9:complement(3740898..3792324)
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AA seq
1199 aa
AA seq
DB search
MELRKYLLCLEFILLLKGLCQCFNIDVKHPRIFSGPEDTLFGFSVLQHEADGEKSMLVGA
PWDGPPNNRKGDVYKCIVGEEKNSNCSKVNLGETALQNVSKNLRNSHLGMTLTPDSPDGF
LACAPLWSQECGTSMFSTGICASVSDDLEPRETIAPTAQRCSTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISSDQMQVGILQYGEVAVHEWSLNDYQTTQEVVEAAKNISRQEGR
ETRTAYAIHMACTEAFSAERGARDGATKVMIVVTDGESHDGEELPDALAECQNRNITRYA
IAVLGHYIRRQQDPDTFISEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNQSSFHMEMSQIGFSTHTLDDGILFGMVGAYDWDGGVLKEGTNGRIMPPREAFESEFP
LELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSDDGDVNIVQALNGEQ
IGSYYGSEVCGMDIDQDGITDVLLVAAPMYLGSGNKEAGRVYIYTLSGVRQQKITPHCKN
YHPVISGNNPPPSSFQEEVFVSNGTLKSEEKSQDARFGYAMAAAPDLNHDGFTDLLVGAP
LEDEHRGAVYVYHGNGIYVIHDYKQRIPGSSISSSLQYFGRSVSARLDLDGDDLIDLAVG
AQGSAVMLSSRSIVQINVSLSFQPHSINVIQKTCQRGGRESSCLNATACFTTVSRSPGPH
SNSFDLWVSAMLDDRKLSARALFDESSHRQTQMSVQVHTGQTVCYKLPFHVYDTADYIRP
ISFSLRFRINNTESGPVLDEGWPTTVKKSIQFFKDCGEDDVCTTDLVLQAHMDISGTRQR
PYVIRSPRRRLAVEVQLQNRLENAYNTSLTLHYSRNLHFSSLSIREDAQLKIECTALGSN
SHSCNVSYPVFRSQSKVNFMLEFEFSCTSLHSRVQMKLNAASDSVEREDTLGDNSVQLQS
FVQYEPDLFVSSDSNLNRYEVHPTRTVSEAIGPEFYTHLRLQNLGCYSVSNLELRLHLPS
VAAGDRVFMTVTDVSSYNATGVNCSVLSDAVQLKARQRDVRPLHPEDMMQDDTLNCSRSW
CTEVVCDVQQLLRGQAAIIRVSRRVHDDFFRKAKYKSVRIIGEYRVTAQETNLIVLGTGT
VWRETVLEVLKGRAIPISLWILIGSIIGGLLLLALIIFILWKLGFFTRKQRGEDENHED
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtaaatacctgttgtgcttggagtttatcctccttctcaaaggattgtgt
cagtgtttcaacatagatgtgaaacatccgcgaatcttcagtggcccagaagacactttg
ttcggcttctcggtcttacagcatgaagcagacggagagaaatcgatgctggtcggagct
ccgtgggacggtccgcccaacaacaggaaaggagatgtctacaagtgcattgtgggagag
gagaaaaactcaaactgcagcaaagtgaatctaggtgagactgccctccagaacgtctcc
aagaacctgaggaactcccacctggggatgaccctgactccagactcacctgatggcttc
ttggcttgtgcccctctgtggtcacaggaatgcggcacgtccatgttcagcactggcatc
tgcgcttcggtcagcgacgacctggaacccagagagaccatcgccccgactgcacaaagg
tgctccacgtacatggacatcgtgatcgtgctggacggatccaacagcatctacccctgg
tacgaggtccagaacttcctcagcaacatcctcagcaagttccacatcagctcggaccag
atgcaggtcggcatcctgcagtacggcgaggtggcggtccacgagtggtctctgaacgac
taccagaccacacaggaggtggtggaggccgccaagaacatcagccgccaggagggccgg
gagactcgcactgcatacgccatccacatggcctgcaccgaggcgttcagcgctgagcgt
ggagcgagagacggcgccaccaaagtgatgatcgtggtgacggacggagaatctcacgac
ggcgaggagctgcctgacgctctggcagagtgtcagaacagaaacatcaccagatacgcc
atcgctgttctgggtcactacatccggagacagcaggaccccgacacgttcatcagtgag
ataaagtacatcgccagcgaccccgacgacaaatacttcttcaacgtgaccgacgaggcg
gcgctcaacgacatcgtggacgctctgggagaccgaatcttcactctggaaggaacactg
ggctacaaccagagctccttccacatggagatgtctcagatcggcttctccacacacact
ctggatgacgggattctgttcgggatggtcggcgcctacgactgggacggcggcgtcctg
aaagaaggcaccaacggacgcatcatgccgcccagagaggccttcgagagcgagtttccc
ctggagctcaagaatcacgcagcttatctaggttacacggtgtcctcggtgatcgtcggc
gactggaggaggctttacgtcgccggagctcctcgattcaaacacaaaggcaaagtgatt
ctgtttgagctcagcgatgacggcgacgtcaacattgtacaggccctcaatggagaacag
attgggtcgtactatggaagtgaagtgtgtgggatggacatcgaccaggacggtatcact
gatgttcttctggttgctgctccaatgtatctcggctcaggaaacaaggaggccggtaga
gtttacatctacaccctcagtggggtaagacagcagaagatcactcctcactgcaagaac
tatcacccagtcatttctggcaataatccgcctccttcgtctttccaggaggaggtgttt
gtatctaacggtaccctgaagtcggaggagaagtcccaggatgccaggtttggttacgcc
atggcagcagctccagatctgaaccatgatggattcactgaccttctagttggagctccg
ctggaggacgaacaccgaggggccgtctacgtctaccacggaaacggcatctacgtgatc
cacgattataaacagcggataccggggtcgtcgatttcctcgtcgctgcagtattttggt
cgcagtgtgagcgctcggttggacttggacggagacgacttgatagacttggcagtggga
gctcagggcagcgctgtgatgctcagctctcggagcatcgtccagatcaacgtcagtctg
tccttccagcctcactccatcaacgtcatccagaaaacctgccagagaggcggcagagaa
tcgtcctgcctgaacgccaccgcctgcttcaccaccgtctcccgctcgcctggacctcac
agtaatagcttcgacctgtgggtgtcggccatgttggatgacaggaagttgtcagcacga
gccttgtttgatgaaagctcccaccgccagacccagatgtcggtccaagtccacacggga
caaaccgtctgctacaagctgcccttccacgtctacgacacagcagactacattcgtcca
atcagcttctcgcttcggtttaggatcaacaacacagagagtggtccagtgttggatgaa
ggctggccgacgaccgtcaagaaatcaatccagttcttcaaagactgcggagaagatgac
gtttgtacaacagatctggtgctgcaggcccacatggacatctcagggacgagacagagg
ccttacgtgatccgcagccctcgtaggcgtctggcggtggaggtgcagctgcagaacagg
ctggaaaacgcctacaacaccagcctgacgctgcactactcacgaaacctgcacttctcc
agcctcagcatcagggaggacgcccaactgaagatcgagtgcaccgctctgggctccaac
agccactcgtgtaacgtcagctatccggtgttccgctcccagtccaaggtgaacttcatg
ctggagtttgagttcagctgcacgtctctgcacagccgagtgcaaatgaagctcaacgct
gccagcgacagtgtggagagagaagacactctgggagacaacagtgttcagctgcagagt
tttgttcagtatgaacccgacctgtttgtcagcagtgactctaacttgaaccgctacgag
gtccatccgactcggacggtgtcagaagcgatcggaccagagttctacacacacctcagg
ctgcagaatctgggctgctactctgtgagtaatctggagctgaggctgcatctgccctcc
gtggctgcaggagatcgagttttcatgaccgtcaccgacgtctcctcctacaacgccacg
ggagtgaactgcagcgtgctgagtgacgccgtccagctgaaggccaggcagagagacgtt
cgccctcttcatcccgaagacatgatgcaggatgacacactgaactgcagcaggtcgtgg
tgcacggaggtcgtgtgcgacgtccagcagcttctgagaggccaagccgccatcattcgg
gtcagccgcagagtccacgacgacttcttcagaaaagccaaatataagtcggtgaggata
ataggtgaatatcgcgtcacggctcaggagacgaacctcatcgttctgggaacgggaaca
gtctggagggagactgtgctggaggtgctgaagggccgagcgattcccatctcgctgtgg
attctgatcggcagcatcatcggaggtttgctgctgctggctctcatcatcttcatcttg
tggaagctcggattcttcacgcgcaaacagagaggcgaggacgagaaccacgaggactga
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