Amphiprion ocellaris (clown anemonefish): 111563037
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Entry
111563037 CDS
T06018
Name
(RefSeq) protein Atg16l2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111563037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111563037
03029 Mitochondrial biogenesis [BR:
aoce03029
]
111563037
Membrane trafficking [BR:
aoce04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
111563037
Others
Specific organelles associated proteins
Auto phagosome
111563037
Mitochondrial biogenesis [BR:
aoce03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111563037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_EML
ATG16
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_NOL10_N
PHD_P300
Rcd1
Cytochrom_D1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
111563037
NCBI-ProteinID:
XP_054868524
Ensembl:
ENSAOCG00000007230
LinkDB
All DBs
Position
7:37507622..37524782
Genome browser
AA seq
613 aa
AA seq
DB search
MDPSGGSQRSGRLQAPEGGGGSQPWRRHIVRQLQHRDRRQQAMFQDLIRCYSRLLEKTSL
AQGLLSCSVRPPSADSLTSLLQQSSQLKKTTGELAYQVVELQQQIKIKERVLDQQHARLQ
EDKRRREGALDEQRALQEQVEWVQQQNGALKTDYDGLLERQRGAESRLREEKVRGGHLLE
DMIHLKQQAAARMNSRNERRSRCVLCHGVVFSSGFCSRAREANLQKQLQTAARSKVTLDS
SSNAPTSRSTSPKNDDLDESMEPRRTRLFRSASATSPRIFTSIREMFGRKRRGHSVCSLE
EDLVFPVGFCLSARVPVRALQVLEAHEQGINAVRFSSSSDLLATGGTDRVLKLWEVRAGS
LAPRATLDGSTEGITCVEFDPAGFRVLAASYDKSAILWRLDDSVPKVTLTGHSRKVTAAR
FSSVLHQVATGSADRTVRLWDLHRAACVQLVDVASFCSDLVCSENCIISGHYDCKIRVWD
TRASSCVQELPAQGRVTSLDLSSDHRQLLSCCRDDCLQLIDLRRWSHNRMCFRSEGFKCG
SDSTKAVISPDSCYLAAGSADGAVYIWNVSTGNLETRLPDKHSSSISAVSWSLSGEYVVS
VDKSRRAVLWSDI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagcggaggctcgcagcggagcggccgtctccaggctccagaaggcggcggc
gggtcgcagccgtggaggagacacatcgtccggcagctgcagcaccgagaccggaggcag
caggccatgttccaggacctgatccgctgctactctcggctgttggagaaaaccagtctg
gctcaaggcctcctgagctgctccgtcaggcctccctccgctgactccctgacgtcgctg
ctgcagcagagcagtcagctgaagaagacgaccggagagctggcctatcaggtggtagag
ctgcagcagcagattaaaatcaaagaacgtgttctggaccaacaacatgccaggctgcag
gaggacaagcggcggcgtgagggtgcgctggatgagcagcgggcgctgcaggagcaggtg
gagtgggtacagcagcagaacggggcgctgaagacagactacgatggcctgctggagcgc
cagaggggggcggagtcacgactcagggaggagaaggtccgaggaggacacctgctggag
gacatgatccacctgaagcagcaggccgccgcccgcatgaacagccgcaacgagcgcagg
tccaggtgtgtgctttgtcacggagtggttttctcgtctggtttctgctccagagctcga
gaggcgaacctccagaagcagcttcagacggcggccaggtcaaaggtcacgttggacagc
tcgtccaatgctcccacctccagatcaacgtctccaaagaacgacgacctggacgagtcg
atggaaccacgaagaactcgactgttcaggtcggcgtcggcgacgtctccaaggatcttc
acctccatcagagagatgtttggcaggaagaggcgtggccactcggtctgcagtctggag
gaggatctggtgtttccggttggattctgtctgtcggccagagttccagtcagagcgctg
caggttctggaggcccatgagcagggtatcaacgccgtcagattcagctccagctccgac
cttctggccaccggaggaaccgaccgggtcctgaagctgtgggaggtccgagcaggctca
ctggctcccagggcgacactggacggcagcaccgagggcatcacctgcgtggagttcgac
ccggcgggcttcagggtcctcgccgcctcctacgacaagtcagccatcttgtggcgcctg
gacgactccgtccccaaggtgactctgacgggtcacagcaggaaggtgacggccgccagg
ttcagcagcgtcctccatcaggtggcgacaggaagcgccgaccgcaccgtccgcctctgg
gacctgcaccgggccgcatgtgttcagttagttgacgtggcgtcattttgcagtgacttg
gtgtgttcagagaactgcatcatcagtggacactacgactgcaagatcagagtctgggac
accagggcttccagctgcgttcaggaacttcctgctcagggtcgagtcacctcattggac
ctcagctccgaccatcgccagctgctcagctgttgccgtgacgactgtctccagctgatc
gacctgaggaggtggagccacaacaggatgtgcttcagatctgagggctttaaatgtggc
agtgacagcaccaaagcagtgatcagtccagacagctgctacctggcagccgggtcagca
gatggcgccgtttacatctggaacgtctcaaccggcaacctggagacccgcctaccggac
aaacacagttcttccatcagcgccgtgtcctggtctctgtccggcgaatacgtcgtcagc
gtggacaagagtaggcgggccgtcctctggagcgacatctga
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