Amphiprion ocellaris (clown anemonefish): 111563054
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Entry
111563054 CDS
T06018
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111563054 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aoce03009
]
111563054 (utp18)
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111563054 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_Vps41
WD40_like
KNTC1_N
DUF7165
Beta-prop_RSE1_2nd
PROPPIN
Pox_D5
DUF3246
DUF4604
Motif
Other DBs
NCBI-GeneID:
111563054
NCBI-ProteinID:
XP_054861147
Ensembl:
ENSAOCG00000007178
LinkDB
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Position
19:complement(9614461..9621719)
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AA seq
574 aa
AA seq
DB search
MCELFLLHADRKHSVDSVSRVRSVPINSCFFWPDSGCARWGNMEDVNLIKLPEDEDGTPA
TKRPRPLTFDPESEEEKRQKNVKRLAMLGETDGSVKLLEELVFGAEDELLERLVEEEDEE
EPAEALLVQHEDDELEDEALQQPLRKAAWVDEDDELEEEVDMRHRYRRNLMKGDAESTMS
KQKLQQRMREQFQKAMGGTPSWAESGTKKKKKKKKAADDDDDDDDDEDDDDEDDLLRRTG
NFVASSESLPSGILRMKKCLHANSCRSSEDRLTTVQFHPSAQVILTAGLDQSVCLFQVDG
KTNPKIQSIHLERFPIHKAQFSRDGETVIATSFRNKMFYLYDMMEGRVSPVHTVRGLNEA
RVKEFSVCPEGGALLLTGSRGYLHLLTLKTKEVVRSMKINGDVSGVAFSADSGKIFANSE
EGEVYVFDLRSSRCMNKFSDDGCVRASSIAAAPNGQYLACGSQSGVVNIYSQEACLNSAN
PKPLKAVMNLLTSATSLAFNPSSEILAIASRDEDEAARLVHMASLTVFSNFPVAKNKFVY
RTSCLDFSPNSGFFSLANNKGHAPLFRLLHYKDF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaactgttcctgctgcatgccgacagaaaacattcagttgattcggtctcacgt
gttcgttcggttccgataaattcgtgttttttctggccggactccggttgcgcccggtgg
ggaaacatggaggacgtaaacctcatcaagctgccggaggacgaggacgggacaccggcc
acgaagagacccagaccgctgacgttcgacccggagagtgaagaggagaagcggcagaag
aacgtgaagaggctggcgatgctgggggagacggacggctcggtgaagctgctggaggag
ctggtgttcggggccgaggacgagctgctggagagactcgtggaggaggaggacgaggag
gagccggctgaagctctgctggtgcagcatgaagacgacgagttggaggacgaagccctt
cagcagccgctcaggaaagctgcctgggtggacgaagacgacgagctggaggaagaggtg
gacatgaggcatcgttaccgtagaaacctgatgaagggagacgccgagtcgaccatgtcc
aaacagaaactacagcagaggatgagggagcagttccagaaggcgatgggaggaactcca
tcgtgggctgaaagcggcaccaagaaaaaaaagaagaagaagaaagctgctgatgatgac
gacgatgatgatgacgacgaagacgatgatgatgaagatgacctgctgaggaggacgggg
aacttcgtggcgtcttcagagagtctgcccagcggcatcctgaggatgaagaagtgtctc
catgccaacagctgtcggtcctcagaggaccgactcaccaccgtccagttccatccctca
gctcaggtcatcctgaccgccggccttgaccaatcagtctgcctcttccaggtggacgga
aagactaacccgaagatccagagcatccacctggagagattccccatccacaaggctcag
ttcagccgggacggagagacggtgatcgccaccagttttaggaacaagatgttctacctg
tacgacatgatggaaggccgagtctcacctgttcacaccgtcagaggtctgaatgaagct
cgggtgaaggagttctcggtgtgtcctgaaggaggcgctctgctgctcactggatctcga
ggataccttcatctgctcacactgaagacgaaggaggtggttcgcagcatgaagatcaac
ggagacgtcagcggcgtcgcgttttctgcagacagcggcaaaatcttcgctaactcagag
gagggggaggtgtatgtgtttgatttgcgcagcagtcggtgtatgaacaagttctctgat
gacggttgtgttcgggcgtcatccatcgctgcggctcctaacggacagtacctggcctgt
ggctctcagtcaggtgtggtcaacatctactcccaggaggcgtgtcttaactcggccaat
ccgaagcctctgaaggccgtgatgaacctgctgacctcggcgacctccctcgccttcaac
ccttcgtctgagatcctcgcaatcgcttcccgagacgaggacgaagccgcacggctggta
cacatggccagcctcaccgtcttctccaacttccccgttgccaagaacaagttcgtctat
cgaaccagctgcctcgacttctccccaaacagcggcttcttctcattggctaacaacaaa
ggccacgcccccctcttcaggttgctgcattacaaagacttctga
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