Amphiprion ocellaris (clown anemonefish): 111563155
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Entry
111563155 CDS
T06018
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111563155 (mms19)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111563155 (mms19)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111563155 (mms19)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
111563155 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
Adaptin_N
PP4R3
DnaB_bind
API5
Motif
Other DBs
NCBI-GeneID:
111563155
NCBI-ProteinID:
XP_023117868
Ensembl:
ENSAOCG00000004558
LinkDB
All DBs
Position
18:complement(20693693..20715340)
Genome browser
AA seq
1041 aa
AA seq
DB search
MRGVGGVRGGTMAADSTLLLSLVEEFVSGLQDSKAKDAAKGVKDGQFTVLQLVEALGLSL
TSSQAPTRARGVQLLSEVLKECYGELTEREVEVLIAFYENRLKDHYVITPPVLQGLRALT
RCTTLPPGSAVSMLRSLFQDVHVQSLMLAERACVYSMLINLMETREAELKGLGADFVFGF
VQSMDGERDPRNLLLAFQIAKSIIHRGYDLGKFTEELFEVTSCYFPIDFTPPPNDPHGIT
KEELIQELRGVLTGTPKFAEFLLPLIIEKLDSDVPSAKLDSLQTLTACVSQYEHKDLAEF
LEGLWASLRREVFQTSSENVESAGLAALTALTSCLSRSVLNSDSEDSLSSFLDLILKDCK
HHLCEPDLKLVWPSAKLLQATCCASNRASHIVTAAVMPSLIDQYNSRTQCSQRRTLLEVV
QRFIQSVKSSQSSDSDESVLSAFREALCSVMFSALSESDSSLQITATSALTSLAQLTGLL
LDSDIELAIDHLTRLLLIEEDGRVSAAVVECAGALAELHPAAFIAKLIPRLKHEMFCEPM
AQDLTEPSKQHSHHAMRQRCLSALAAVSKQSSVVQDSTPVLLEVLSSAHTGSVSFSVDEV
VLACHSLQRIAEQVEDEEETGRCFHDVIIPRLLSLALQAALQGEGSPGVRSPLVEEAVLS
AMVPVISTSCSRLQPTMAAQTASRAVSLFLDGDVSFLPDNSFPSHIQLLKKQQGDSWSQS
QMVCLLMGCVCSLPRSVEVPQIDQLLSALEEMSCTCSHQLSYTSAAKCFAGLVNKRPPGD
SLDSLIQRTMKRVCSELDSTSSSVRIQAFTLMIWVAKALLLRYHPLFKTLTDKLFSLLDD
TDLGPMAADSFSLLMSDFTDVLNRSCHADVRIMYRQRFFSENSAKLVQGFNAATQEKKSN
YLKALSNIVNKLPKQVQVTELPALLSLLLEALTCPDQGVQLSTLSCLEPVLINPPPALIQ
QLEALVNRLLALLCSPAMNVRIVSLRCIHALSSFPVHEVLPFRARVLRALAKPLDDKKRL
VRSEAVQARGEWFLLGSPGGR
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtgttggtggcgttagagggggcacgatggctgcggacagtaccttgctgctg
tctctggtggaggaatttgtctccggactacaggacagcaaggccaaggatgcagcaaaa
ggtgtcaaagatggacagtttacagtgctgcagctggtggaagcacttggactcagtctg
accagctctcaagctcccactcgagcccgaggagtccagcttctctctgaagttctcaag
gagtgctatggagagctcacggagagagaagtggaagttcttattgccttctatgaaaac
cgtcttaaggaccattatgtcatcacaccgcctgtgttacagggactcagagcgctgact
agatgtacaacgttacctcccggctcagctgtgtccatgctgaggtctttgttccaggat
gttcatgtacagtctctgatgcttgcagaaagagcctgtgtctacagcatgctcatcaac
ctcatggagaccagagaggctgaactgaaaggtttgggggctgactttgtgtttggtttt
gtccaatccatggacggggagagagatcctcgcaacctcctgttagccttccagattgcc
aaaagcatcatccacagaggatacgatctaggtaaattcacagaggagctgttcgaagtg
acgtcctgctatttccccatcgacttcacccctcctcccaacgacccccacggcatcacc
aaagaagagctaattcaggagctgaggggcgtcctcactgggactccaaaatttgccgag
ttcctgttacctctcatcatcgagaagctggactcagacgttccgagcgcaaagctggac
tcgctgcagactctgactgcttgtgtgtcgcagtatgaacacaaggacttggccgaattc
ctcgagggactctgggcgtcactgcgccgagaggtgtttcaaacatccagtgagaacgtt
gagtctgcaggcctcgctgctctcaccgcactcacttcctgcctgtctcgctcagtcctc
aactctgactcagaagactctctcagctccttcctggatctcattctcaaagactgcaag
catcacctgtgtgagccggacttaaagcttgtatggcccagtgccaagctgctccaagcc
acctgctgcgcctccaacagggcgagtcacatcgtaacagcagccgtcatgccgtctctc
attgaccagtacaacagcagaacgcagtgttcccagagacggacattgctggaggtggtg
cagcgattcatccagtcagtgaaaagcagtcagtcttcagacagtgatgagagtgtgctg
tcagccttcagagaggctctgtgcagcgttatgttttcagctctgtctgagagtgactcc
agtctgcagatcactgccacctctgccctcacctcactggcacagctaacaggtctgctg
ttagactctgatattgaattagctatagatcacctgacaagactgttgctgattgaggag
gacggcagagtcagtgctgcagtggtggagtgtgctggagccttagcagagctacaccct
gcagctttcatcgctaaactgatcccaagactaaagcatgagatgttttgtgagcccatg
gctcaagacctcacagaaccctctaagcagcattcccatcatgcaatgcgtcagcggtgt
ttgtctgctctggccgcagtgtctaaacaatccagtgttgtccaggacagcacacctgtc
ctcctggaggtcctcagttcagcacacacaggtagcgtcagtttttcggtggatgaggtg
gtgttggcgtgtcacagccttcagaggatagcagagcaggttgaggacgaggaggagaca
ggacgttgcttccatgatgtcatcattcctcgcctgctgtctctggcgctgcaggcagca
ctgcagggtgaagggtctcctggtgttcgtagtcctctggtggaggaggcggttctgtct
gctatggttcctgtcatcagtacttcttgctccaggctgcagcccacgatggcagcgcag
acggcatcgagggctgtgtctctcttcctggatggtgatgtttcctttttgcctgacaac
tccttcccttcacacattcagctgctcaagaagcagcagggagactcctggagccagtct
cagatggtttgtctcctcatgggttgtgtttgttcgttacctcgcagtgtggaggttcct
cagatcgaccagctgttgtcagcgctggaggagatgagctgcacctgcagccatcagctg
tcatacacgtctgctgcaaagtgcttcgctggtctggtcaacaagaggccaccaggtgat
tctcttgacagcctgatacagaggacaatgaagagagtctgcagtgagttggactcaacg
tcctcctctgtgcgcattcaggccttcacacttatgatctgggtggccaaggctctgctt
ctgagatatcaccctctgttcaaaacactgactgacaagctcttctctctgcttgatgat
actgatttgggtccgatggcagcagacagcttctctctgctgatgagcgactttactgat
gtcctgaaccgtagttgccacgctgacgtgcgcatcatgtaccgccagcgcttcttcagc
gagaattcagccaagttggttcagggcttcaacgctgcaacacaagagaagaagtccaac
tatttgaaggctctgtccaatatcgttaacaagctgcccaagcaggttcaagtcactgaa
ctaccagcgctgctctctctgctgctggaagccttgacttgtcctgatcagggcgtccag
ctgtccactctgtcctgtctggagcctgtcctcatcaacccaccaccagctctcattcag
cagctggaggctttagtcaacaggctgctggccctcctctgcagtccagccatgaacgta
cggattgtgtcattgcggtgcatccatgctctttccagcttccctgtacatgaggtccta
ccttttcgggctcgagttctgcgagcgttggcgaagcctctcgatgacaagaagaggctg
gtgaggagcgaagctgtccaggcaagaggagagtggttcctcctcggaagtcctggtgga
agatga
DBGET
integrated database retrieval system
