Amphiprion ocellaris (clown anemonefish): 111563279
Help
Entry
111563279 CDS
T06018
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111563279 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111563279 (lrrc4ca)
Cell adhesion molecules [BR:
aoce04515
]
Immunoglobulin superfamily
NGL family
111563279 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
111563279
NCBI-ProteinID:
XP_023118060
Ensembl:
ENSAOCG00000030638
UniProt:
A0AAQ5ZSW6
LinkDB
All DBs
Position
3:complement(5497920..5668903)
Genome browser
AA seq
648 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPPHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTTVQQKVGP
TPSGGIWESISPTSTTTTTVRIPLSTRVTEKTYTIPVTERGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttatccgaccccctgtttgtgctgctcctggccctccagctgctggtggtggca
ggtctggttcgtgctcagacgtgtccctctgtatgctcctgcagtaaccagttcagcaaa
gtcatctgcactcgcagaggtctgcgggatgttcccgatgggatctctaccaacacacgc
tacctgaatctgcaagaaaatctcattcaggtcataaaggtggatagcttcaagcacctg
agacatctggagattctgcagctgagcaaaaaccacatacgcaaaattgagctcggggcc
ttcaatggactggccagcctcaataccttggagctttttgataaccgcctcaccaccatc
ccaaacggggcatttgagtacctgtccaaattaaaggagctttggctgaggaataacccc
atagagagcatcccctcctatgctttcaacagagtgccctcattacggaggttggacctt
ggggagctcaaacggctctcctacatatctgagggggcctttgaagggctgagcaatctg
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggta
aagctggatgaactagagatgtcaggaaaccagctatctgtcatccggcctggttcattt
aaagggcttatccacttgcaaaagctatggatgatgcatgcccagatccagaccatagaa
aggaactcctttgatgacctgcagtcactcgtggagctcaatctagctcacaataacctt
accctcttgccccatgatctcttcactcctttacatcacctggagagggtgcatttgcac
cacaacccatggaattgtaactgtgacatcctctggctaagctggtggcttaaggagatg
gtaccagcaaacacaagctgctgcgcccgatgtagctcaccgccccaccataagggacga
tacattggcgagctggaccagaattactttcactgttatgctcctgttattgtggagcct
cccgcagacctaaatgtgacagaaggaagcgctgcagagctgaaatgcagagccagctcc
ttgacctcagtgagctggattacacccaatggttccatcatgacacacggtgcatacaag
gtcagaatctctgtgcttaatgatggtacactgaactttaccaatgtaaccatgcaggac
acaggcacatatacatgtatggtcagtaattccgcaggtaatacaacagcatctgccaca
ctcaatgtgtcctccacagagaacagcagtttcagctacttcaccacagtgacagtggag
acaatagagacgccacataacgaaggcttcaccacgactgtgcagcagaaggtgggcccc
acaccctctggtggtatatgggagtctatttcacccacttctacaacaaccaccacggtc
cgaattccactgtccacccgtgtcacagagaagacttacacgatccctgtcacagagcgg
ggcggagagggttcactgaacggcttggacgaggtgatgaagacgaccaagatcatcatc
ggctgcttcgtagcaatcacgctcatggcagctgtcatgctgataatcttctacaagatg
cgcaaacagcaccaccagcagaaccaccacgcacccacacgcaccattgagatcatcaac
gtggacgaggactgtgtcacgggaggcccgggcatggagggccacctgactctgcctcct
ctcgagcatgagcacctcaaccactataacacctacaagactgcatacaaccatgcctcc
actatcaattccatacacagctcagcgcacgaacctttgttaatccgggccagctcgaaa
gacaatgtacaagagacccaaatctaa
DBGET
integrated database retrieval system
