Amphiprion ocellaris (clown anemonefish): 111563291
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Entry
111563291 CDS
T06018
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111563291 (pms1)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111563291 (pms1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111563291
NCBI-ProteinID:
XP_023118087
Ensembl:
ENSAOCG00000023860
LinkDB
All DBs
Position
11:complement(21849745..21870165)
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AA seq
921 aa
AA seq
DB search
MKQLPSDTVRLLSSSQVITSVLNVVKELMENSLDAGASSIDVKLDNYGLDRIEVRDNGHG
IKAVDTPVMAVRHFTSKICSHEDLEHLETYGFRGEALGSICAVAEVAVTTKTEEDDVSTQ
YMLDFKGNIVSQKPSHLGQGTTVSVMKLFKNLPVRRQCFSSTKKCKEELKKVQDLLMAYA
IVKPELRLMLVHNKVGVWQKAKVADNRSALLATLGSSAVANLLPCHHHQEQPEIVLEGFF
PKPGADYSTTSSSSPDKTFLFVNNRPVQLKEIMKLLRQHYSAQYPDDPARNRFPMLMLKI
TVPPSSVDVNLTPDKTQVLLHNKEAVLTAVEALLVSLYGFRPNTDLPAEKQLSHKTLPSS
SNPLQPHDSLLDIEPSVERDNSLTNHSDNCLKDALQHGDAASSTASADASLHHRTSNGSS
SSSVADDWIVSQIPVELVSSFSLCDDEVAQNCTETTEMGSASKSPERITDNVVSAADKSK
DQILAEDWSRGTALTDPLSGEPLQPVTIHQPSRHNDSDLDEVKSQSSSKKKTFNIITEKQ
AALTAYDLITNRAMRAPLSPAALFDKEARAEVLREKPTASLLDISIAVRERWKNLGEDNR
KKYEEKAKKHLEHHEQKSKSASAEGPRELSVSTSRSHMQGQKRKAPSSNQQLLDELFSAQ
PQKKMRNPSSKPSQPLPCSMAALQLQLQRLSSQSSAASRGLCLVNRLASQSAWVILCGQR
LMLLNPFRVEEALLFKRLLENNILPAVSLQNPIQLTDGILGGAEYAEALCNMEKHSPELN
GATLFSDPRLVANGFKIKLTPGLASAERHLEVTAMADCVPFLGVEDLREILTAVLHKKAR
TVQECRPLKVTNYLQGEAVRLARQLPTNLSREDVEETLVRMEQQLGETNRTCIHGRPFLQ
HLSDIPCTDQQAKALLRPLEL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcttccatcggacactgtgcggctgctgtccagctctcaggtcatcacttct
gtgttgaatgtggtgaaagaactgatggaaaattctctggatgctggggcttcaagcatt
gatgttaaactggacaactacggcttggaccggatagaagtacgtgacaatggtcatggc
atcaaagctgtagatactcctgtgatggctgttcgacatttcacttccaagatctgcagc
cacgaagacctagagcatctggaaacatatggcttcaggggagaagcactgggctccatc
tgtgcagtggctgaggtggctgttaccacaaagacggaggaggatgacgtcagtacccaa
tacatgcttgactttaaagggaacattgtttctcagaagccgtctcacttaggtcaaggt
acaacagtgagtgtaatgaaacttttcaagaatcttccagtgagaaggcagtgcttttcc
tccacaaaaaagtgcaaagaggaactaaagaaagtgcaggacctgctgatggcctacgcc
attgtaaaacctgaactgagactcatgcttgttcacaataaggtgggggtttggcagaag
gccaaggtggccgataacagaagtgccctccttgctacattggggtccagtgctgttgcc
aacttgctcccttgccaccatcaccaagagcaaccagagattgttttagaaggatttttt
cccaagcctggagctgattactccactacaagctcatctagtcctgacaaaacttttcta
tttgtcaacaaccgacctgtgcagctaaaggaaataatgaagttgctgcgtcaacactac
agtgctcaatatccggatgacccagcacgaaatcgatttccgatgctcatgcttaaaatc
acagttccaccctcctcagtggatgttaatctgacaccagacaagacccaggttcttctt
cacaacaaggaggctgtgttgactgcagtggaggcattgctggtctctctgtatggcttt
cggcctaacactgatctcccagctgagaagcagctcagccacaagacacttccctcatca
tctaatcctttgcagcctcatgattcactattggacattgagccaagtgtagagagggat
aacagtctcaccaaccacagtgataactgcctcaaagatgcacttcaacatggtgatgca
gcttcgtcaacagcaagcgcagatgcttcactgcaccaccggacctcaaacggcagctct
tcatcctctgtggcagacgactggattgtcagccagatcccagttgagcttgtctctagc
ttttctctttgtgatgatgaagtggcacagaactgcacggagacaacagaaatgggttca
gcaagcaaatccccagagagaattacagacaatgtagtgtcagctgcagacaaaagcaaa
gaccaaatattagctgaggactggagccggggtacagctcttacagatcccttatcagga
gaacctctgcagcctgtgacaattcatcagccctcaaggcataatgactccgacctggat
gaggtgaagagtcagagcagctcgaaaaaaaagacattcaatattattacagagaagcag
gctgctctaacggcctacgacctgatcaccaatcgcgccatgagggcaccgctgtctcct
gctgccctgtttgacaaggaggccagagctgaggtcctcagggagaaacctacagccagt
ctgctggatatcagcatcgctgttcgcgagaggtggaaaaacctgggggaggataaccgt
aagaagtatgaggagaaggcaaaaaaacacctggaacaccatgaacaaaaatctaagtca
gcttcagctgaaggccccagggagctcagtgtgagcacctcgaggagccacatgcagggt
cagaaacgcaaggccccatcatccaaccagcagctgctggacgagctcttctctgcacag
cctcaaaagaaaatgaggaacccatcgtctaaaccctcgcagcccctcccctgcagcatg
gctgcccttcagctgcagcttcagcgcctctcatcccagagcagcgcagcatcacggggc
ctctgtcttgtaaaccggctggcctctcagagcgcctgggtcattttatgtggtcagagg
ctcatgttgttaaacccatttcgagtggaggaagccttgctgtttaaaagacttctagag
aataatatacttccagcagtgagtctgcagaaccctatacagttaacagatggaattcta
gggggagctgagtatgctgaggctttgtgcaacatggagaaacacagccctgaactgaac
ggagcgaccctgttttctgatcctaggcttgtggctaatgggtttaaaatcaaactcact
ccaggcctcgcgtcagccgagagacatctggaagtgacagcaatggcagactgcgtgcct
ttcctcggtgtggaggacctcagggagattctgactgcagttcttcacaagaaagccagg
actgtgcaagagtgccggccacttaaagtcacaaattacctacaaggggaagcagttcgt
cttgcccgtcaactgcccacaaatttatcgcgggaagatgtggaggaaacccttgtacgg
atggaacagcagctgggtgagacaaaccgaacctgtattcatggacgaccctttctccaa
cacttatctgacatcccatgtacggaccagcaagctaaggctctgctgcggcctttggaa
ctgtaa
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